RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 TMEM213A2RRL7 107 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 ZNF233A6NK53 670 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 SMLR1H3BR10 107 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 GOLGA8RI6L899 631 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 M0QXV9 152 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 CBR3O75828 277 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 MPZL1O95297 269 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 HLA-GP17693 338 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 NELFEP18615 380 aaKnown RBP2.47□□□□□ -2.01
SNRPF-202ENST00000549580 TEAD1P28347 426 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 CD40LGP29965 261 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 SLC18A1P54219 525 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 PLTPP55058 493 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 CMC4P56277 68 aaPredicted RBP2.47□□□□□ -2.01
SNRPF-202ENST00000549580 RPL10AP62906 217 aaKnown RBP2.47□□□□□ -2.01
SNRPF-202ENST00000549580 GRB2P62993 217 aaKnown RBP2.47□□□□□ -2.01
SNRPF-202ENST00000549580 TMEM249Q2WGJ8 235 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 ZNF101Q8IZC7 436 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 RNF10Q8N5U6 811 aaKnown RBP2.47□□□□□ -2.01
SNRPF-202ENST00000549580 SPANXA2-OT1Q8N9U9 137 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 ACBD4Q8NC06 268 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 ATP6V1C2Q8NEY4 427 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 OR4K2Q8NGD2 314 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 OR5M1Q8NGP8 315 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 OR9A2Q8NGT5 310 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 OR2AE1Q8NHA4 323 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 PHF10Q8WUB8 498 aaKnown RBP2.47□□□□□ -2.01
SNRPF-202ENST00000549580 HGDQ93099 445 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 CPNE4Q96A23 557 aaPredicted RBP2.47□□□□□ -2.01
SNRPF-202ENST00000549580 CCDC127Q96BQ5 260 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 STARD4Q96DR4 205 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 ARL5BQ96KC2 179 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 SMIM8Q96KF7 97 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 OR10C1Q96KK4 312 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 QKIQ96PU8 341 aaKnown RBP eCLIP2.47□□□□□ -2.01
SNRPF-202ENST00000549580 RNF157Q96PX1 679 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 SPIN2AQ99865 258 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 SPIN2BQ9BPZ2 258 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 MRPL20Q9BYC9 149 aaKnown RBP2.47□□□□□ -2.01
SNRPF-202ENST00000549580 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 DIABLOQ9NR28 239 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 SDHAF3Q9NRP4 125 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 CA10Q9NS85 328 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 RAB22AQ9UL26 194 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 ATP6V1DQ9Y5K8 247 aa2.47□□□□□ -2.01
SNRPF-202ENST00000549580 NUP214P35658 2090 aaPredicted RBP2.46□□□□□ -2.01
SNRPF-202ENST00000549580 MYO10Q9HD67 2058 aa2.46□□□□□ -2.01
SNRPF-202ENST00000549580 IGLV4-60A0A075B6I1 120 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 IGHV1-3A0A0C4DH29 117 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 A0A0G2JMP0 313 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 A0A0X1KG70 313 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 A0A1B0GX12 115 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 TMEM72A0PK05 275 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 UPK2O00526 184 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 SCO1O75880 301 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 CYB5R3P00387 301 aaPredicted RBP2.46□□□□□ -2.02
SNRPF-202ENST00000549580 RLN2P04090 185 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 OR4Q2P0C623 313 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 RD3LP0DJH9 198 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 NPY1RP25929 384 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 AQP5P55064 265 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 RAB31Q13636 194 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 SHHQ15465 462 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 CEACAM21Q3KPI0 293 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 MORN3Q6PF18 240 aaPredicted RBP2.46□□□□□ -2.02
SNRPF-202ENST00000549580 PLEKHG7Q6ZR37 379 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 SHISA6Q6ZSJ9 500 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 BOD1L2Q8IYS8 172 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 ORMDL3Q8N138 153 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 SLC35G3Q8N808 338 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 OR5AK3PQ8NH89 298 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 DDI1Q8WTU0 396 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 BLNKQ8WV28 456 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 C22orf15Q8WYQ4 148 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.46□□□□□ -2.02
SNRPF-202ENST00000549580 ZNF514Q96K75 400 aaPredicted RBP2.46□□□□□ -2.02
SNRPF-202ENST00000549580 C7orf50Q9BRJ6 194 aaKnown RBP2.46□□□□□ -2.02
SNRPF-202ENST00000549580 UPF3BQ9BZI7 483 aaKnown RBP2.46□□□□□ -2.02
SNRPF-202ENST00000549580 TBL1XR1Q9BZK7 514 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 C1orf109Q9NX04 203 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 PUS1Q9Y606 427 aaKnown RBP eCLIP2.46□□□□□ -2.02
SNRPF-202ENST00000549580 ANKRD12Q6UB98 2062 aa2.46□□□□□ -2.02
SNRPF-202ENST00000549580 PLA2R1Q13018 1463 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 ABCB11O95342 1321 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 DOCK8Q8NF50 2099 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 IGKV1-6A0A0C4DH72 117 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 C1orf232A0A0U1RR37 186 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 A0A1W2PRG6 482 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 OR2AT4A6NND4 320 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 MAGEB4O15481 346 aaPredicted RBP2.45□□□□□ -2.02
SNRPF-202ENST00000549580 DHRS3O75911 302 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 WISP3O95389 354 aaPredicted RBP2.45□□□□□ -2.02
SNRPF-202ENST00000549580 IGKV1-39P01597 117 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 IGKV1D-39P04432 117 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 CDK1P06493 297 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 PET100P0DJ07 73 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 TAC1P20366 129 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 PSMB9P28065 219 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 TAS2R43P59537 309 aa2.45□□□□□ -2.02
SNRPF-202ENST00000549580 UBE2G2P60604 165 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms