RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 SNU13P55769 128 aaKnown RBP17.72■□□□□ 0.43
VPS29-206ENST00000549578 P2RY14Q15391 338 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 SLC22A6Q4U2R8 563 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 TMEM155Q4W5P6 130 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 HES5Q5TA89 166 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 STUMQ69YW2 141 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 FAM166AQ6J272 317 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 FAM58AQ8N1B3 248 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 MAPK1IP1LQ8NDC0 245 aa17.72■□□□□ 0.43
VPS29-206ENST00000549578 C1orf147Q96MC9 270 aaPredicted RBP17.72■□□□□ 0.43
VPS29-206ENST00000549578 A0A1W2PP11 408 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 OR2AT4A6NND4 320 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 CEACAM18A8MTB9 384 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 HTR3BO95264 441 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 PSG2P11465 335 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 SERPINA2P20848 420 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 USF1P22415 310 aaPredicted RBP17.71■□□□□ 0.43
VPS29-206ENST00000549578 CLDN12P56749 244 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 BLMHQ13867 455 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 RAB11BQ15907 218 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 LYPD2Q6UXB3 125 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 SPICQ8N5J4 248 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 TBC1D15Q8TC07 691 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 SLC25A28Q96A46 364 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 C12orf43Q96C57 262 aaKnown RBP17.71■□□□□ 0.43
VPS29-206ENST00000549578 KCNK15Q9H427 330 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 HMG20AQ9NP66 347 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 IL36GQ9NZH8 169 aa17.71■□□□□ 0.43
VPS29-206ENST00000549578 IGKV1D-17A0A075B6S4 117 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 RFPL4AA6NLU0 287 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 IFITM5A6NNB3 132 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 RFPL4AL1F8VTS6 287 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 DUSP1P28562 367 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 IL2RGP31785 369 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 SERPINB10P48595 397 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 CEBPDP49716 269 aaPredicted RBP17.7■□□□□ 0.42
VPS29-206ENST00000549578 KCNJ8Q15842 424 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 DCDC5Q6ZRR9 648 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 CIARTQ8N365 385 aaPredicted RBP17.7■□□□□ 0.42
VPS29-206ENST00000549578 ANGPTL6Q8NI99 470 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 CCL13Q99616 98 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 OR14J1Q9UGF5 321 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 PCDHB10Q9UN67 800 aa17.7■□□□□ 0.42
VPS29-206ENST00000549578 CELSR1Q9NYQ6 3014 aa17.69■□□□□ 0.42
VPS29-206ENST00000549578 CREBBPQ92793 2442 aa17.69■□□□□ 0.42
VPS29-206ENST00000549578 NOTOA8MTQ0 251 aa17.69■□□□□ 0.42
VPS29-206ENST00000549578 TNFRSF13BO14836 293 aaPredicted RBP17.69■□□□□ 0.42
VPS29-206ENST00000549578 KNG1P01042 644 aa17.69■□□□□ 0.42
VPS29-206ENST00000549578 CSTBP04080 98 aaKnown RBP17.69■□□□□ 0.42
VPS29-206ENST00000549578 SLC2A2P11168 524 aaPredicted RBP17.69■□□□□ 0.42
VPS29-206ENST00000549578 AMY2BP19961 511 aa17.69■□□□□ 0.42
VPS29-206ENST00000549578 FGF12P61328 243 aa17.69■□□□□ 0.42
VPS29-206ENST00000549578 DGUOKQ16854 277 aa17.69■□□□□ 0.42
VPS29-206ENST00000549578 ELP2Q6IA86 826 aa17.69■□□□□ 0.42
VPS29-206ENST00000549578 RHOFQ9HBH0 211 aa17.69■□□□□ 0.42
VPS29-206ENST00000549578 FLNAP21333 2647 aaKnown RBP17.69■□□□□ 0.42
VPS29-206ENST00000549578 A0A1B0GW55 424 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 H7C1Q1 480 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 AIPO00170 330 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 ADAM20O43506 726 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 IGHV2-5P01817 119 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 DUX4L2P0CJ85 424 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 DUX4L3P0CJ86 424 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 DUX4L4P0CJ87 422 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 DUX4L5P0CJ88 424 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 DUX4L6P0CJ89 424 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 DUX4L7P0CJ90 424 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 RPS2P15880 293 aaKnown RBP17.68■□□□□ 0.42
VPS29-206ENST00000549578 RPS19P39019 145 aaKnown RBP17.68■□□□□ 0.42
VPS29-206ENST00000549578 GABRA2P47869 451 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 LMO4P61968 165 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 LOXL1Q08397 574 aaPredicted RBP17.68■□□□□ 0.42
VPS29-206ENST00000549578 OR10K2Q6IF99 312 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 DUX4L9Q6RFH8 374 aaPredicted RBP17.68■□□□□ 0.42
VPS29-206ENST00000549578 CD177Q8N6Q3 437 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 TMEM104Q8NE00 496 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 Q8NFD4 153 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 RAB2BQ8WUD1 216 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 ZNF665Q9H7R5 613 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 DUX4Q9UBX2 424 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 STEAP1Q9UHE8 339 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 ZNF222Q9UK12 451 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 CEPT1Q9Y6K0 416 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 ZNF469Q96JG9 3925 aaPredicted RBP17.68■□□□□ 0.42
VPS29-206ENST00000549578 CR1P17927 2039 aa17.68■□□□□ 0.42
VPS29-206ENST00000549578 A0A0B4J203 849 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 TMPRSS2O15393 492 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 ZNF780AO75290 641 aaPredicted RBP17.67■□□□□ 0.42
VPS29-206ENST00000549578 CFPP27918 469 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 TMBIM6P55061 237 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 PIGYQ3MUY2 71 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 SFXN4Q6P4A7 337 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 FIP1L1Q6UN15 594 aaKnown RBP17.67■□□□□ 0.42
VPS29-206ENST00000549578 FAM216BQ8N7L0 139 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 OR51D1Q8NGF3 324 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 NDNFQ8TB73 568 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 FAM46BQ96A09 425 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 BANF2Q9H503 90 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 PATZ1Q9HBE1 687 aaKnown RBP17.67■□□□□ 0.42
VPS29-206ENST00000549578 CTSZQ9UBR2 303 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms