RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TSPO2Q5TGU0 170 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 TMEM200BQ69YZ2 307 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 DHRS7BQ6IAN0 325 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-212ENST00000549162 CLEC9AQ6UXN8 241 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 FAM220AQ7Z4H9 259 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 STPG3Q8N7X2 389 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 C11orf44Q8N8P7 122 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 DTX3Q8N9I9 347 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 ST6GALNAC6Q969X2 333 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 NEDD4LQ96PU5 975 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 MEGF9Q9H1U4 602 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 AUNIPQ9H7T9 357 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 KCNIP1Q9NZI2 227 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 COMMD9Q9P000 198 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 PLA2G2DQ9UNK4 145 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 TBL2Q9Y4P3 447 aaKnown RBP4.1□□□□□ -1.75
SCAF11-212ENST00000549162 KIAA0100Q14667 2235 aaKnown RBP4.09□□□□□ -1.75
SCAF11-212ENST00000549162 DNAH12Q6ZR08 3092 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 TRAV27A0A087WT01 109 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-212ENST00000549162 DAPL1A0PJW8 107 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 MYL12BO14950 172 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 CLDN14O95500 239 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 TAS2R31P59538 309 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 AP3S2P59780 193 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 RPS7P62081 194 aaKnown RBP4.09□□□□□ -1.75
SCAF11-212ENST00000549162 PDZK1IP1Q13113 114 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 C1orf189Q5VU69 101 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 RRM2BQ7LG56 351 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 SLC25A42Q86VD7 318 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 H1FOOQ8IZA3 346 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-212ENST00000549162 FTMTQ8N4E7 242 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 NHLRC2Q8NBF2 726 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 NPBQ8NG41 125 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 OR56B1Q8NGI3 324 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 STOML3Q8TAV4 291 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 RFT1Q96AA3 541 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 ZBTB9Q96C00 473 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 PGAM5Q96HS1 289 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 TMEM68Q96MH6 324 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 PPIL3Q9H2H8 161 aaKnown RBP4.09□□□□□ -1.75
SCAF11-212ENST00000549162 JPT1Q9UK76 154 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 A0A0A6YYD4 124 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 A6NL46 340 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 B8ZZF3 427 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 CDC14BO60729 498 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 SULT1A3P0DMM9 295 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 SULT1A4P0DMN0 295 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 PITPNBP48739 271 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 CX3CR1P49238 355 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 CAMPP49913 170 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 FOXL2P58012 376 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 OR2B6P58173 313 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 MRPL49Q13405 166 aaKnown RBP4.09□□□□□ -1.75
SCAF11-212ENST00000549162 OR7A5Q15622 319 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 LRRC36Q1X8D7 754 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 GSG1Q2KHT4 349 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 ACSM3Q53FZ2 586 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 CLEC12AQ5QGZ9 265 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 BCL2L15Q5TBC7 163 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 RSBN1Q5VWQ0 802 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-212ENST00000549162 SIGIRRQ6IA17 410 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 ETFRF1Q6IPR1 90 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 CNIH2Q6PI25 160 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 SEMA6DQ8NFY4 1073 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 OR51A7Q8NH64 312 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 MOB3AQ96BX8 217 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 C18orf12Q96KH6 178 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 AMELYQ99218 206 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 ISG20L2Q9H9L3 353 aaKnown RBP4.09□□□□□ -1.75
SCAF11-212ENST00000549162 NGBQ9NPG2 151 aa4.09□□□□□ -1.75
SCAF11-212ENST00000549162 CEP350Q5VT06 3117 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 TMEM272A0A1B0GTI8 110 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 A8MTW9 85 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF736B4DX44 427 aaPredicted RBP4.09□□□□□ -1.76
SCAF11-212ENST00000549162 F8VVB4 439 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 F8VWA3 439 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 NPIPA3F8WFD2 350 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 NKX2-8O15522 239 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 RBBP9O75884 186 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 IGLV2-14P01704 120 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 CTSDP07339 412 aaPredicted RBP4.09□□□□□ -1.76
SCAF11-212ENST00000549162 RRASP10301 218 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 PSMB6P28072 239 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 SRPXP78539 464 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 PRAMEF17Q5VTA0 474 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF66Q6ZN08 573 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 WDR86Q86TI4 376 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 MUC20Q8N307 709 aaPredicted RBP4.09□□□□□ -1.76
SCAF11-212ENST00000549162 AKR7LQ8NHP1 331 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF563Q8TA94 476 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 MRGPRDQ8TDS7 321 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 GHSRQ92847 366 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 HRH4Q9H3N8 390 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 Q9N2K0 584 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 NUP50Q9UKX7 468 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 VDAC3Q9Y277 283 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 CACNG2Q9Y698 323 aa4.09□□□□□ -1.76
SCAF11-212ENST00000549162 IGKV1-27A0A075B6S5 117 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 GNGT2O14610 69 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms