RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 HIST2H2BDQ6DRA6 164 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 CCBE1Q6UXH8 406 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-218ENST00000548945 IZUMO2Q6UXV1 221 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 ZNF782Q6ZMW2 699 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-218ENST00000548945 ZBTB49Q6ZSB9 765 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 ZDHHC13Q8IUH4 622 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 DYNAPQ8N1N2 210 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 MRAPQ8TCY5 172 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 DNAJC9Q8WXX5 260 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 R3HDM4Q96D70 268 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 NRBF2Q96F24 287 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 CNN2Q99439 309 aaKnown RBP10.37□□□□□ -0.75
PTCH1-218ENST00000548945 MNTQ99583 582 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 ZNF184Q99676 751 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-218ENST00000548945 PKIBQ9C010 78 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 MMP28Q9H239 520 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 V9GYS6 101 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 CCDC182A6NF36 153 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 ADARB2-AS1A8MUL3 147 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 PRR32B1ATL7 298 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 LOC110117498-PIK3R3F6TDL0 507 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 G3V2T6 193 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 H0YJX3 145 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 PEX14O75381 377 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 ARG1P05089 322 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 CHRM2P08172 466 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 HSPA13P48723 471 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 MEF2CQ06413 473 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-218ENST00000548945 MFGE8Q08431 387 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-218ENST00000548945 HABP2Q14520 560 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-218ENST00000548945 SNAPC1Q16533 368 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 MINOS1Q5TGZ0 78 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 ELMOD2Q8IZ81 293 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 CBR4Q8N4T8 237 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 SGCDQ92629 289 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 OSBPL10Q9BXB5 764 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 SEBOXQ9HB31 216 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-218ENST00000548945 OR14J1Q9UGF5 321 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 IKZF2Q9UKS7 526 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 COPS3Q9UNS2 423 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 SLC22A13Q9Y226 551 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 R4GMQ9 66 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 MINOS1-NBL1R4GNA1 71 aa10.36□□□□□ -0.75
PTCH1-218ENST00000548945 A0A1B0GTI1 187 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 H3BUI4 141 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 ZNF737O75373 536 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 MRPL3P09001 348 aaKnown RBP10.35□□□□□ -0.75
PTCH1-218ENST00000548945 IGHV1-8P0DP01 117 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 PIPP12273 146 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-218ENST00000548945 AZGP1P25311 298 aaKnown RBP10.35□□□□□ -0.75
PTCH1-218ENST00000548945 RAB13P51153 203 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 OR12D2P58182 307 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 SSX2Q16385 188 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 BCL2L15Q5TBC7 163 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 TMEM236Q5W0B7 351 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 ZNF322Q6U7Q0 402 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-218ENST00000548945 TMEM219Q86XT9 240 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 HS3ST5Q8IZT8 346 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 LYG1Q8N1E2 194 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 ASCC1Q8N9N2 400 aaKnown RBP10.35□□□□□ -0.75
PTCH1-218ENST00000548945 WFDC9Q8NEX5 89 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 OR14K1Q8NGZ2 314 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 PHF21AQ96BD5 680 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 CITED2Q99967 270 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-218ENST00000548945 PRRG3Q9BZD7 231 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 GABARAPL1Q9H0R8 117 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 GPR173Q9NS66 373 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 TVP23BQ9NYZ1 205 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 OR52A1Q9UKL2 312 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 SNX5Q9Y5X3 404 aa10.35□□□□□ -0.75
PTCH1-218ENST00000548945 EI24O14681 340 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 CCL1P22362 96 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 PRKACGP22612 351 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 ALDH3A2P51648 485 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 CRISP1P54107 249 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 AQP4P55087 323 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 CXCR4P61073 352 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 ESRRGP62508 458 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 COL10A1Q03692 680 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 PLA1AQ53H76 456 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 LDLRAD2Q5SZI1 272 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 GDPD3Q7L5L3 318 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 OR8H2Q8N162 312 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 ZNF714Q96N38 554 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 SLC29A1Q99808 456 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 PAPOLBQ9NRJ5 636 aaKnown RBP10.34□□□□□ -0.75
PTCH1-218ENST00000548945 AURKAIP1Q9NWT8 199 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-218ENST00000548945 SLC7A11Q9UPY5 501 aa10.34□□□□□ -0.75
PTCH1-218ENST00000548945 hADV38S2A0JD32 116 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 FAM90A22PA8MWA6 464 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 F2RL2O00254 374 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 VDAC2P45880 294 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-218ENST00000548945 EDDM3BP56851 147 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 CD83Q01151 205 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 DYNC1I2Q13409 638 aaKnown RBP10.33□□□□□ -0.76
PTCH1-218ENST00000548945 ARSJQ5FYB0 599 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-218ENST00000548945 MEPCEQ7L2J0 689 aaKnown RBP10.33□□□□□ -0.76
PTCH1-218ENST00000548945 C16orf82Q7Z2V1 217 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 ANGPTL5Q86XS5 388 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 CCDC54Q8NEL0 328 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms