RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 CXCL1P09341 107 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 DTYMKP23919 212 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 OR14L1PQ8NHC6 308 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 PRDM13Q9H4Q3 707 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 PIGLQ9Y2B2 252 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 ZNF726A6NNF4 738 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 ZNF587BE7ETH6 402 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 MSTNO14793 375 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 PPP1R2P9O14990 202 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 HIST1H2BKO60814 126 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 HIST1H2BJP06899 126 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 HIST1H2BOP23527 126 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 HIST1H2BBP33778 126 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 OPRM1P35372 400 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 CEBPGP53567 150 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 HIST1H2BDP58876 126 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 HIST1H2BCP62807 126 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 DLK1P80370 383 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 HIST2H2BEQ16778 126 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.16■□□□□ 0.82
NPAS3-206ENST00000548645 ZNF343Q6P1L6 599 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 SPSB3Q6PJ21 355 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 OR5L1Q8NGL2 311 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 HIST1H2BHQ93079 126 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 HIST1H2BNQ99877 126 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 HIST1H2BMQ99879 126 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 PIGQQ9BRB3 760 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 AK3Q9UIJ7 227 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 ELOA3CA0A087WX78 387 aaPredicted RBP20.16■□□□□ 0.82
NPAS3-206ENST00000548645 ATP6V0CP27449 155 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 ZNF429Q86V71 674 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 OR2C3Q8N628 320 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 OR1L3Q8NH93 324 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 THAP3Q8WTV1 239 aaPredicted RBP20.16■□□□□ 0.82
NPAS3-206ENST00000548645 MARS2Q96GW9 593 aaKnown RBP20.16■□□□□ 0.82
NPAS3-206ENST00000548645 TCFL5Q9UL49 500 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 HSF4Q9ULV5 492 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 CYP8B1Q9UNU6 501 aa20.16■□□□□ 0.82
NPAS3-206ENST00000548645 EYSQ5T1H1 3165 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 GLI4P10075 376 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 ASCL1P50553 236 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 DNLZQ5SXM8 178 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 C1orf189Q5VU69 101 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 SPNS3Q6ZMD2 512 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 ZFP62Q8NB50 900 aaPredicted RBP20.15■□□□□ 0.82
NPAS3-206ENST00000548645 LMX1AQ8TE12 382 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 TVP23CQ96ET8 276 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 JSRP1Q96MG2 331 aaPredicted RBP20.15■□□□□ 0.82
NPAS3-206ENST00000548645 ANGPTL4Q9BY76 406 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 ZNF700Q9H0M5 742 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 SLCO1B1Q9Y6L6 691 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 IGHV3-20A0A0C4DH32 117 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 F5H5K5 113 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 OPN1LWP04000 364 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 NKX6-1P78426 367 aaPredicted RBP20.15■□□□□ 0.82
NPAS3-206ENST00000548645 FBXL14Q8N1E6 418 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 OR4D5Q8NGN0 318 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 OR13D1Q8NGV5 346 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 S100PBPQ96BU1 408 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 B3GALT1Q9Y5Z6 326 aa20.15■□□□□ 0.82
NPAS3-206ENST00000548645 FAM230AA0A1W2PPH8 454 aa20.14■□□□□ 0.82
NPAS3-206ENST00000548645 HSPA12AO43301 675 aa20.14■□□□□ 0.82
NPAS3-206ENST00000548645 RBP2P50120 134 aa20.14■□□□□ 0.82
NPAS3-206ENST00000548645 CD81P60033 236 aa20.14■□□□□ 0.82
NPAS3-206ENST00000548645 HIST3H3Q16695 136 aa20.14■□□□□ 0.82
NPAS3-206ENST00000548645 TMEM176BQ3YBM2 270 aaPredicted RBP20.14■□□□□ 0.82
NPAS3-206ENST00000548645 DBX2Q6ZNG2 339 aa20.14■□□□□ 0.82
NPAS3-206ENST00000548645 C14orf144Q96I85 54 aa20.14■□□□□ 0.82
NPAS3-206ENST00000548645 OXGR1Q96P68 337 aa20.14■□□□□ 0.82
NPAS3-206ENST00000548645 PIAS3Q9Y6X2 628 aa20.14■□□□□ 0.82
NPAS3-206ENST00000548645 URGCP-MRPS24S4R325 110 aa20.14■□□□□ 0.82
NPAS3-206ENST00000548645 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.14■□□□□ 0.81
NPAS3-206ENST00000548645 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.14■□□□□ 0.81
NPAS3-206ENST00000548645 CDRT15L2A8MXV6 281 aa20.14■□□□□ 0.81
NPAS3-206ENST00000548645 H0YL77 283 aa20.14■□□□□ 0.81
NPAS3-206ENST00000548645 ZNF205O95201 554 aa20.14■□□□□ 0.81
NPAS3-206ENST00000548645 GUCA1AP43080 201 aaPredicted RBP20.14■□□□□ 0.81
NPAS3-206ENST00000548645 HAGHQ16775 308 aa20.14■□□□□ 0.81
NPAS3-206ENST00000548645 SLC25A53Q5H9E4 307 aa20.14■□□□□ 0.81
NPAS3-206ENST00000548645 C10orf35Q96D05 121 aa20.14■□□□□ 0.81
NPAS3-206ENST00000548645 NIPSNAP3BQ9BS92 247 aa20.14■□□□□ 0.81
NPAS3-206ENST00000548645 METTL9Q9H1A3 318 aa20.14■□□□□ 0.81
NPAS3-206ENST00000548645 KLRF1Q9NZS2 232 aa20.14■□□□□ 0.81
NPAS3-206ENST00000548645 PCDH15Q96QU1 1955 aa20.13■□□□□ 0.81
NPAS3-206ENST00000548645 BCAT2O15382 392 aaPredicted RBP20.13■□□□□ 0.81
NPAS3-206ENST00000548645 LINC01565O15544 149 aa20.13■□□□□ 0.81
NPAS3-206ENST00000548645 PHF1O43189 567 aaPredicted RBP20.13■□□□□ 0.81
NPAS3-206ENST00000548645 KLK2P20151 261 aa20.13■□□□□ 0.81
NPAS3-206ENST00000548645 ERVFRD-1P60508 538 aa20.13■□□□□ 0.81
NPAS3-206ENST00000548645 TAF9Q16594 264 aa20.13■□□□□ 0.81
NPAS3-206ENST00000548645 PLPP5Q8NEB5 264 aa20.13■□□□□ 0.81
NPAS3-206ENST00000548645 LIPGQ9Y5X9 500 aa20.13■□□□□ 0.81
NPAS3-206ENST00000548645 CCDC187A0A096LP49 1063 aa20.13■□□□□ 0.81
NPAS3-206ENST00000548645 RPL36A-HNRNPH2H7BZ11 118 aa20.13■□□□□ 0.81
NPAS3-206ENST00000548645 PITX3O75364 302 aa20.13■□□□□ 0.81
NPAS3-206ENST00000548645 HSPB1P04792 205 aaKnown RBP20.13■□□□□ 0.81
NPAS3-206ENST00000548645 MSX1P28360 303 aa20.13■□□□□ 0.81
NPAS3-206ENST00000548645 RGS19P49795 217 aa20.13■□□□□ 0.81
NPAS3-206ENST00000548645 LSM6P62312 80 aaKnown RBP20.13■□□□□ 0.81
NPAS3-206ENST00000548645 COL19A1Q14993 1142 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms