RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 CDKN1AP38936 164 aa24.24■■□□□ 1.47
BRF1-213ENST00000548421 NHLRC3Q5JS37 347 aa24.24■■□□□ 1.47
BRF1-213ENST00000548421 BIVMQ86UB2 503 aa24.24■■□□□ 1.47
BRF1-213ENST00000548421 GCSAMQ8N6F7 178 aa24.24■■□□□ 1.47
BRF1-213ENST00000548421 OR51T1Q8NGJ9 327 aa24.24■■□□□ 1.47
BRF1-213ENST00000548421 TSC22D3Q99576 134 aa24.24■■□□□ 1.47
BRF1-213ENST00000548421 TREM2Q9NZC2 230 aa24.24■■□□□ 1.47
BRF1-213ENST00000548421 EXTL2Q9UBQ6 330 aa24.24■■□□□ 1.47
BRF1-213ENST00000548421 ST3GAL6Q9Y274 331 aa24.24■■□□□ 1.47
BRF1-213ENST00000548421 NPTNQ9Y639 398 aa24.24■■□□□ 1.47
BRF1-213ENST00000548421 AKAP6Q13023 2319 aa24.24■■□□□ 1.47
BRF1-213ENST00000548421 TACC2O95359 2948 aa24.24■■□□□ 1.47
BRF1-213ENST00000548421 IFNL4K9M1U5 179 aa24.23■■□□□ 1.47
BRF1-213ENST00000548421 OVOL3O00110 214 aa24.23■■□□□ 1.47
BRF1-213ENST00000548421 LHBP01229 141 aa24.23■■□□□ 1.47
BRF1-213ENST00000548421 CPT2P23786 658 aa24.23■■□□□ 1.47
BRF1-213ENST00000548421 RBM11P57052 281 aaKnown RBP24.23■■□□□ 1.47
BRF1-213ENST00000548421 GMFBP60983 142 aa24.23■■□□□ 1.47
BRF1-213ENST00000548421 PIGYQ3MUY2 71 aa24.23■■□□□ 1.47
BRF1-213ENST00000548421 CCDC190Q86UF4 302 aa24.23■■□□□ 1.47
BRF1-213ENST00000548421 PHF21AQ96BD5 680 aa24.23■■□□□ 1.47
BRF1-213ENST00000548421 NICN1Q9BSH3 213 aa24.23■■□□□ 1.47
BRF1-213ENST00000548421 RASL12Q9NYN1 266 aa24.23■■□□□ 1.47
BRF1-213ENST00000548421 PTPN13Q12923 2485 aa24.22■■□□□ 1.47
BRF1-213ENST00000548421 WNT9BO14905 357 aa24.22■■□□□ 1.47
BRF1-213ENST00000548421 SCGNO76038 276 aa24.22■■□□□ 1.47
BRF1-213ENST00000548421 SPANXN2Q5MJ10 180 aa24.22■■□□□ 1.47
BRF1-213ENST00000548421 FIP1L1Q6UN15 594 aaKnown RBP24.22■■□□□ 1.47
BRF1-213ENST00000548421 OR4M1Q8NGD0 313 aa24.22■■□□□ 1.47
BRF1-213ENST00000548421 WDR13Q9H1Z4 485 aa24.22■■□□□ 1.47
BRF1-213ENST00000548421 CACNG2Q9Y698 323 aa24.22■■□□□ 1.47
BRF1-213ENST00000548421 A0A0A6YYH2 397 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 A6NJ64 397 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 CYB5R3P00387 301 aaPredicted RBP24.21■■□□□ 1.47
BRF1-213ENST00000548421 EGR1P18146 543 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 CDK2P24941 298 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 ETV6P41212 452 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 SMIM21Q3B7S5 101 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 RAB12Q6IQ22 244 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 ACP7Q6ZNF0 438 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 TGIF2LYQ8IUE0 185 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 C1orf87Q8N0U7 546 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 FAM89BQ8N5H3 189 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 OR56B1Q8NGI3 324 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 CCL17Q92583 94 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 POM121Q96HA1 1249 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 DIABLOQ9NR28 239 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 TMEM106BQ9NUM4 274 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 IL36RNQ9UBH0 155 aa24.21■■□□□ 1.47
BRF1-213ENST00000548421 A0A0A6YYD4 124 aa24.2■■□□□ 1.47
BRF1-213ENST00000548421 C3orf80F5H4A9 247 aa24.2■■□□□ 1.47
BRF1-213ENST00000548421 CHRM2P08172 466 aa24.2■■□□□ 1.47
BRF1-213ENST00000548421 RBMXP38159 391 aaKnown RBP24.2■■□□□ 1.47
BRF1-213ENST00000548421 PITPNBP48739 271 aa24.2■■□□□ 1.47
BRF1-213ENST00000548421 VEGFCP49767 419 aa24.2■■□□□ 1.47
BRF1-213ENST00000548421 SNU13P55769 128 aaKnown RBP24.2■■□□□ 1.47
BRF1-213ENST00000548421 HOXA4Q00056 320 aaPredicted RBP24.2■■□□□ 1.47
BRF1-213ENST00000548421 HFEQ30201 348 aa24.2■■□□□ 1.47
BRF1-213ENST00000548421 S100ZQ8WXG8 99 aa24.2■■□□□ 1.47
BRF1-213ENST00000548421 CXorf56Q9H5V9 222 aa24.2■■□□□ 1.47
BRF1-213ENST00000548421 GEMIN2O14893 280 aaKnown RBP24.19■■□□□ 1.46
BRF1-213ENST00000548421 GABRR1P24046 479 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 MRPS11P82912 194 aaKnown RBP24.19■■□□□ 1.46
BRF1-213ENST00000548421 IL13RA2Q14627 380 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 TAF9Q16594 264 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 ZNF787Q6DD87 383 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 LINC00596Q86U02 117 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 BOLLQ8N9W6 283 aaKnown RBP24.19■■□□□ 1.46
BRF1-213ENST00000548421 AKIP1Q9NQ31 210 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A10PA6NDY2 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A18PA6NE21 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A16PA6NEW6 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A20PA6NIJ5 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A8PA6NJQ4 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A7PA6NKC0 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A22PA8MWA6 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A12PA8MX19 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A5PA8MXJ8 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A23PA8MXZ1 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP24.19■■□□□ 1.46
BRF1-213ENST00000548421 RAB27BO00194 218 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 XRCC3O43542 346 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A15PP0C7V4 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A13PP0C7W8 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A14PP0C7W9 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A24PP0C7X0 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 MOGAT2Q3SYC2 334 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 SPIN3Q5JUX0 258 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 TMEM69Q5SWH9 247 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FAM90A1Q86YD7 464 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 DTX3Q8N9I9 347 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 RDH5Q92781 318 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 NUDT16L1Q9BRJ7 211 aaKnown RBP24.19■■□□□ 1.46
BRF1-213ENST00000548421 DLL4Q9NR61 685 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 DCAF16Q9NXF7 216 aa24.19■■□□□ 1.46
BRF1-213ENST00000548421 FBN2P35556 2912 aa24.18■■□□□ 1.46
BRF1-213ENST00000548421 USF3Q68DE3 2245 aa24.18■■□□□ 1.46
BRF1-213ENST00000548421 FABP12A6NFH5 140 aa24.18■■□□□ 1.46
BRF1-213ENST00000548421 TMEM178BH3BS89 294 aa24.18■■□□□ 1.46
BRF1-213ENST00000548421 METAP1DQ6UB28 335 aaPredicted RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms