RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 NAV2Q8IVL1 2488 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 NUMA1Q14980 2115 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 MYH11P35749 1972 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 ANKRD17O75179 2603 aaKnown RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 COL6A6A6NMZ7 2263 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 COL27A1Q8IZC6 1860 aaPredicted RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 TRBV6-6A0A0A6YYG2 114 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 PLAC8L1A1L4L8 177 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 E5RI56 91 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 H0YGG7 62 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 PSMD12O00232 456 aaPredicted RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 CCL22O00626 93 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 PRMT5O14744 637 aaPredicted RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 CLOCKO15516 846 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 SS18L1O75177 396 aaPredicted RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 OR2J3O76001 311 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 NSA2O95478 260 aaKnown RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 CSTAP01040 98 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 BGLAPP02818 100 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 CATP04040 527 aaKnown RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 SLC35G6P0C7Q6 338 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 UBTFL6P0CB48 400 aaPredicted RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 GABRA1P14867 456 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 SRMP19623 302 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 AZU1P20160 251 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 GSTM3P21266 225 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 MSR1P21757 451 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 PSMB5P28074 263 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 PEBP1P30086 187 aaKnown RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 NUP62P37198 522 aaPredicted RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 RFX3P48380 749 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 NMUP48645 174 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 SSR4P51571 173 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 KRTAP12-2P59991 146 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 RPS15AP62244 130 aaKnown RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 PAX5Q02548 391 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 RELAQ04206 551 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 LIPEQ05469 1076 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 PRDX1Q06830 199 aaKnown RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 CDH17Q12864 832 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 CAPRIN1Q14444 709 aaKnown RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 RSPO1Q2MKA7 263 aaPredicted RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 TTLL9Q3SXZ7 439 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 H3F3CQ6NXT2 135 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF836Q6ZNA1 936 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 LRRC6Q86X45 466 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 CYP4Z2PQ8N1L4 340 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 SPERTQ8NA61 448 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 DRAXINQ8NBI3 349 aaPredicted RBP2.61□□□□□ -1.99
PTCH1-216ENST00000548379 HSD17B11Q8NBQ5 300 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 ACBD4Q8NC06 268 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 OR8K1Q8NGG5 319 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 OR2A1Q8NGT9 310 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 OR51Q1Q8NH59 317 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 MARCH1Q8TCQ1 289 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 LRRC39Q96DD0 335 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 ASB9Q96DX5 294 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 ECSITQ9BQ95 431 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 OSBPL10Q9BXB5 764 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 ELOVL6Q9H5J4 265 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 AHSPQ9NZD4 102 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 TAC3Q9UHF0 121 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 PCYOX1Q9UHG3 505 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 CEP192Q8TEP8 1941 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 NACAE9PAV3 2078 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 MYOFQ9NZM1 2061 aa2.61□□□□□ -1.99
PTCH1-216ENST00000548379 PI4KAP42356 2102 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 BOD1L1Q8NFC6 3051 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 SHROOM3Q8TF72 1996 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 GOLGA4Q13439 2230 aaKnown RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 LRRK2Q5S007 2527 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 hCG_1818297A0A087WSY0 165 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 A6NDX4 124 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 OR51F1A6NGY5 319 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 IQCF5A8MTL0 148 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 H3BNH8 94 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 TEX46H3BTG2 121 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF701M0R085 212 aaPredicted RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 OR1I1O60431 355 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 SUPT3HO75486 399 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 CA11O75493 328 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 CLPXO76031 633 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 FGGP02679 453 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 IL1RNP18510 177 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 OMGP23515 440 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 STOMP27105 288 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 FOXN2P32314 431 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 RFC3P40938 356 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 AQP2P41181 271 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 RORCP51449 518 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 RWDD2BP57060 319 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 RAB11AP62491 216 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 TFF3Q07654 80 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 SPA17Q15506 151 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 RAB11BQ15907 218 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 MRPL23Q16540 153 aaKnown RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 PIGGQ5H8A4 983 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 COA6Q5JTJ3 125 aaKnown RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 LINC00173Q6ZV60 143 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 ABHD13Q7L211 337 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms