RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 FAM110DQ8TAY7 271 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-211ENST00000547950 UBE2FQ969M7 185 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 SLAMF9Q96A28 289 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 EME1Q96AY2 570 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 C16orf95Q9H693 158 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 MOB1AQ9H8S9 216 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 PLEKHA1Q9HB21 404 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 WARS2Q9UGM6 360 aaKnown RBP5.46□□□□□ -1.54
SCAF11-211ENST00000547950 ENOPH1Q9UHY7 261 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 GNG8Q9UK08 70 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.46□□□□□ -1.54
SCAF11-211ENST00000547950 OAZ3Q9UMX2 235 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 POLDIP2Q9Y2S7 368 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 SIGLEC9Q9Y336 463 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 F8VVB4 439 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 F8VWA3 439 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 CIB2O75838 187 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 TSPAN9O75954 239 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 RPLP1P05386 114 aaKnown RBP5.45□□□□□ -1.54
SCAF11-211ENST00000547950 CALCBP10092 127 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 GABRA5P31644 462 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 RAB13P51153 203 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 BMXP51813 675 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 FUT6P51993 359 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 EDDM3BP56851 147 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 IL24Q13007 206 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 ZNF273Q14593 569 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 UBE2V2Q15819 145 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 LRRC75BQ2VPJ9 315 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 TP53I3Q53FA7 332 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 PDLIM3Q53GG5 364 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-211ENST00000547950 PLA1AQ53H76 456 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 HIST2H2BDQ6DRA6 164 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 ZNF782Q6ZMW2 699 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-211ENST00000547950 SLC25A26Q70HW3 274 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 GDPD3Q7L5L3 318 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 CATSPERDQ86XM0 798 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 EGFL6Q8IUX8 553 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 PRSS35Q8N3Z0 413 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 C11orf42Q8N5U0 333 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 C11orf44Q8N8P7 122 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 OR8J1Q8NGP2 316 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 PPP1R35Q8TAP8 253 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 RFKQ969G6 155 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 CENPNQ96H22 339 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-211ENST00000547950 AJUBAQ96IF1 538 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 CEP19Q96LK0 163 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 KRTAP9-9Q9BYP9 154 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 PKIBQ9C010 78 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 GABARAPL1Q9H0R8 117 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 MEGF9Q9H1U4 602 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 MMP27Q9H306 513 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 HES4Q9HCC6 221 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 USE1Q9NZ43 259 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 MTCH1Q9NZJ7 389 aa5.45□□□□□ -1.54
SCAF11-211ENST00000547950 IGKV1-27A0A075B6S5 117 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 DAPL1A0PJW8 107 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 DHRS7CA6NNS2 312 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 K7N7A8 449 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 ENTPD6O75354 484 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 GATBO75879 557 aaKnown RBP5.44□□□□□ -1.54
SCAF11-211ENST00000547950 SULT1C4O75897 302 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 TSPAN15O95858 294 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 ARG1P05089 322 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 CHRM2P08172 466 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 OCM2P0CE71 109 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 OCMP0CE72 109 aaPredicted RBP5.44□□□□□ -1.54
SCAF11-211ENST00000547950 ZNF728P0DKX0 622 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 VSIG10L2P0DP72 767 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 CCL1P22362 96 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 GABRR1P24046 479 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 MPZP25189 248 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 DUSP1P28562 367 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 SNU13P55769 128 aaKnown RBP5.44□□□□□ -1.54
SCAF11-211ENST00000547950 MTCP1P56278 107 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 CDC42P60953 191 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 ERVK11-1P61568 191 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 ZNF85Q03923 595 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 DYNC1I2Q13409 638 aaKnown RBP5.44□□□□□ -1.54
SCAF11-211ENST00000547950 EDDM3AQ14507 147 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 FAM189A2Q15884 450 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 SSX2Q16385 188 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 ZIK1Q3SY52 487 aaPredicted RBP5.44□□□□□ -1.54
SCAF11-211ENST00000547950 Q6ZSR3 168 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 FAM220AQ7Z4H9 259 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 LHFPL4Q7Z7J7 247 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 C1QL4Q86Z23 238 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 OR4C13Q8NGP0 309 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 PYDC1Q8WXC3 89 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 FGGYQ96C11 551 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 BORCS8Q96FH0 119 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 NKX3-1Q99801 234 aaPredicted RBP5.44□□□□□ -1.54
SCAF11-211ENST00000547950 OSBPL10Q9BXB5 764 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 GABARAPL3Q9BY60 117 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 CHST6Q9GZX3 395 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 IMPAD1Q9NX62 359 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 FBLN5Q9UBX5 448 aa5.44□□□□□ -1.54
SCAF11-211ENST00000547950 AASSQ9UDR5 926 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms