RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SIRPDQ9H106 197 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 ELL3Q9HB65 397 aaPredicted RBP15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 SCN3BQ9NY72 215 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 OR14J1Q9UGF5 321 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 ZNF281Q9Y2X9 895 aa15.46■□□□□ 0.07
PRPF40B-206ENST00000547764 TRAV40A0A0B4J280 105 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 RNF212BA8MTL3 300 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 MYL12BO14950 172 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 SULT1B1O43704 296 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 CDK1P06493 297 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 NPBWR2P48146 333 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 HSPA13P48723 471 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 WNT4P56705 351 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 PDZK1IP1Q13113 114 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 DOC2BQ14184 412 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 METTL11BQ5VVY1 283 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 ASPHD2Q6ICH7 369 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 CRIP3Q6Q6R5 217 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 BCL6BQ8N143 479 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 ZNF561Q8N587 486 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 NANOGP1Q8N7R0 232 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 TMEM158Q8WZ71 300 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 NEK6Q9HC98 313 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 ERGIC3Q9Y282 383 aa15.45■□□□□ 0.06
PRPF40B-206ENST00000547764 A0A0A6YYJ9 748 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 ANGPTL7O43827 346 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 VENTXO95231 258 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 CYB5AP00167 134 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 CD2P06729 351 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 HCKP08631 526 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 BCL3P20749 454 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 CAPZA1P52907 286 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 TAS2R43P59537 309 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 KRTAP24-1Q3LI83 254 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 RNLSQ5VYX0 342 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 ZNF529Q6P280 563 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 USP43Q70EL4 1123 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 Q8IYB0 196 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 OR5D18Q8NGL1 313 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 OR13C5Q8NGS8 318 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 SGCDQ92629 289 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 MYDGFQ969H8 173 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 TMEM106AQ96A25 262 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 PGLYRP3Q96LB9 341 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 DMRTB1Q96MA1 342 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 SUCNR1Q9BXA5 334 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 MS4A7Q9GZW8 240 aaPredicted RBP15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 RBFOX1Q9NWB1 397 aaKnown RBP15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 PAK1IP1Q9NWT1 392 aaPredicted RBP15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 TAS2R4Q9NYW5 299 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 ONECUT1Q9UBC0 465 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 KPTNQ9Y664 436 aa15.44■□□□□ 0.06
PRPF40B-206ENST00000547764 IGKV1-12A0A0C4DH73 117 aa15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 PNMA8CA0A1B0GUJ8 204 aa15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 IGKV1D-12P01611 117 aa15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 RAB3AP20336 220 aa15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 HILS1P60008 231 aa15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 RPS11P62280 158 aaKnown RBP eCLIP15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 KISS1Q15726 138 aa15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 TUSC1Q2TAM9 212 aa15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 OR51A2Q8NGJ7 313 aa15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 EMG1Q92979 244 aaKnown RBP15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 CDCA4Q9BXL8 241 aa15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 IL36RNQ9UBH0 155 aa15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 SOX21Q9Y651 276 aaPredicted RBP15.43■□□□□ 0.06
PRPF40B-206ENST00000547764 TRBV5-5A0A0J9YX44 114 aa15.42■□□□□ 0.06
PRPF40B-206ENST00000547764 CALCBP10092 127 aa15.42■□□□□ 0.06
PRPF40B-206ENST00000547764 ZP1P60852 638 aa15.42■□□□□ 0.06
PRPF40B-206ENST00000547764 SLC35A2P78381 396 aa15.42■□□□□ 0.06
PRPF40B-206ENST00000547764 COL10A1Q03692 680 aa15.42■□□□□ 0.06
PRPF40B-206ENST00000547764 YIF1BQ5BJH7 314 aa15.42■□□□□ 0.06
PRPF40B-206ENST00000547764 GPR157Q5UAW9 335 aa15.42■□□□□ 0.06
PRPF40B-206ENST00000547764 BRD3OSQ6XYD6 125 aa15.42■□□□□ 0.06
PRPF40B-206ENST00000547764 C9orf139Q6ZV77 190 aa15.42■□□□□ 0.06
PRPF40B-206ENST00000547764 FAM58AQ8N1B3 248 aa15.42■□□□□ 0.06
PRPF40B-206ENST00000547764 TPRKBQ9Y3C4 175 aa15.42■□□□□ 0.06
PRPF40B-206ENST00000547764 PCDHGB5Q9Y5G0 923 aa15.42■□□□□ 0.06
PRPF40B-206ENST00000547764 TRBV23-1A0A0A0MS06 115 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 CENPVL3A0A0U1RRI6 287 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 A0A1W2PQ09 198 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 KDM4BO94953 1096 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 TK1P04183 234 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 CHRM2P08172 466 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 CELP19835 753 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 VHLP40337 213 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 PDCD1Q15116 288 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 VMO1Q7Z5L0 202 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 SAXO1Q8IYX7 474 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 CMTM4Q8IZR5 234 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 KIR3DL3Q8N743 410 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 SIGLECL1Q8N7X8 197 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 LHX4Q969G2 390 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 ORAI1Q96D31 301 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 CNBD2Q96M20 576 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 MND1Q9BWT6 205 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 FAM234AQ9H0X4 552 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 DUSP21Q9H596 190 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 HMG20AQ9NP66 347 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 C19orf12Q9NSK7 152 aa15.41■□□□□ 0.06
PRPF40B-206ENST00000547764 DNHD1Q96M86 4753 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms