RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 C1QTNF9P0C862 333 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 CHATP28329 748 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 EIF2B2P49770 351 aaKnown RBP11.5□□□□□ -0.57
PTCH1-215ENST00000547672 ZNF83P51522 516 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 TAS2R31P59538 309 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 TSPAN5P62079 268 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 CARTPTQ16568 116 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 DMRTC1Q5HYR2 192 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 NKAPLQ5M9Q1 402 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 FAHD2BQ6P2I3 314 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-215ENST00000547672 HAGHLQ6PII5 290 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-215ENST00000547672 GLDNQ6ZMI3 551 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-215ENST00000547672 GLCCI1Q86VQ1 547 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 CALHM1Q8IU99 346 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 FAM58AQ8N1B3 248 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 BEST4Q8NFU0 473 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 OR6F1Q8NGZ6 308 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 TERB2Q8NHR7 220 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 GIMAP1Q8WWP7 306 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 ASB13Q8WXK3 278 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 EMG1Q92979 244 aaKnown RBP11.5□□□□□ -0.57
PTCH1-215ENST00000547672 FAHD2AQ96GK7 314 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 CCDC120Q96HB5 630 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 TRAF4Q9BUZ4 470 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-215ENST00000547672 ST6GALNAC5Q9BVH7 336 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 COQ3Q9NZJ6 369 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 TINAGQ9UJW2 476 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 MEMO1Q9Y316 297 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 TRGV8A0A0C4DH27 118 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 IGKV1-12A0A0C4DH73 117 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 PLSCR5A0PG75 271 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 WIPF3A6NGB9 483 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 NOS1APO75052 506 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-215ENST00000547672 OR7C1O76099 320 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-215ENST00000547672 IGKV1D-12P01611 117 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 SFTPBP07988 381 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 ZNF250P15622 560 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 CA7P43166 264 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 SNU13P55769 128 aaKnown RBP11.49□□□□□ -0.57
PTCH1-215ENST00000547672 PRSS12P56730 875 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 UBE2MP61081 183 aaKnown RBP11.49□□□□□ -0.57
PTCH1-215ENST00000547672 CBX3Q13185 183 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 ZFP69Q49AA0 526 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 C6orf201Q7Z4U5 140 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 TCTE3Q8IZS6 198 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 RPRMLQ8N4K4 120 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 KDF1Q8NAX2 398 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-215ENST00000547672 DRAXINQ8NBI3 349 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-215ENST00000547672 OR5AP2Q8NGF4 316 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 DVL3Q92997 716 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-215ENST00000547672 FBXW5Q969U6 566 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 SLAMF9Q96A28 289 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 DMRTA2Q96SC8 542 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 ZNF442Q9H7R0 627 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 IFT22Q9H7X7 185 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 MGAT4AQ9UM21 535 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 CACNA1AO00555 2505 aa11.49□□□□□ -0.57
PTCH1-215ENST00000547672 A0A1B0GWJ7 208 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 TMEM82A0PJX8 343 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 M0QYG6 137 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 SH2D1BO14796 132 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 GEMIN2O14893 280 aaKnown RBP11.48□□□□□ -0.57
PTCH1-215ENST00000547672 IGHV3-13P01766 116 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 BCL3P20749 454 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 HRH1P35367 487 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 FABP6P51161 128 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 KLF3P57682 345 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-215ENST00000547672 ARPC4P59998 168 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 FAM27E3Q08E93 113 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 SURF2Q15527 256 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-215ENST00000547672 SCGB2B2Q4G0G5 96 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 TMEM255AQ5JRV8 349 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 ATAD3CQ5T2N8 411 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 MYPOPQ86VE0 399 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-215ENST00000547672 NUP37Q8NFH4 326 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 OR10AD1Q8NGE0 317 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 SLC6A7Q99884 636 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 DHRS9Q9BPW9 319 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 FAAP24Q9BTP7 215 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 TINAGL1Q9GZM7 467 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-215ENST00000547672 PPA2Q9H2U2 334 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 ZNF286AQ9HBT8 521 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 C12orf4Q9NQ89 552 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 NECAP2Q9NVZ3 263 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 RASL12Q9NYN1 266 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 MTCH1Q9NZJ7 389 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 SVILO95425 2214 aa11.48□□□□□ -0.57
PTCH1-215ENST00000547672 A0A0B4J293 547 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 PYCARD-AS1I3L0S3 204 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 ERVH48-1M5A8F1 160 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 CTXN2P0C2S0 81 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 ZNF735P0CB33 412 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 ANXA3P12429 323 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 PRKACAP17612 351 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 TNFSF4P23510 183 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 CD40P25942 277 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 CHRNB4P30926 498 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 MDH2P40926 338 aaKnown RBP11.47□□□□□ -0.57
PTCH1-215ENST00000547672 ASCL1P50553 236 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 PIGYQ3MUY2 71 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms