RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 SLC30A7Q8NEW0 376 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 AQP10Q96PS8 301 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 TTTY12Q9BZ98 90 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 LIME1Q9H400 295 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 ACKR4Q9NPB9 350 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 CYTL1Q9NRR1 136 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 ARID1AO14497 2285 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 CRYM-AS1A6NIL9 109 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 ZNF850A8MQ14 1090 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 FAM166BA8MTA8 275 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 ITGA3P26006 1051 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 MAGEA5P43359 124 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 BRICD5Q6PL45 260 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 DHRS11Q6UWP2 260 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 IQCF2Q8IXL9 164 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 BAP18Q8IXM2 172 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 OR51F2Q8NH61 342 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 ADAMTS17Q8TE56 1095 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 DYRK2Q92630 601 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 SLC6A15Q9H2J7 730 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 GSKIPQ9P0R6 139 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 MEMO1Q9Y316 297 aa13.43□□□□□ -0.26
BRF1-212ENST00000547562 RPL36A-HNRNPH2H7BZ11 118 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 RBM39Q14498 530 aaKnown RBP13.42□□□□□ -0.26
BRF1-212ENST00000547562 C9orf135Q5VTT2 229 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 PCDHB16Q9NRJ7 776 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 PLA2G3Q9NZ20 509 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 PRELID1Q9Y255 219 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 BDP1A6H8Y1 2624 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 A0A096LPE4 126 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 A0A1W2PPZ6 126 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 M0R296 226 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 SYNGR4O95473 234 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 STK11Q15831 433 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 PLA2G2CQ5R387 149 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 CALHM1Q8IU99 346 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 FAM219AQ8IW50 185 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 MS4A7Q9GZW8 240 aaPredicted RBP13.42□□□□□ -0.26
BRF1-212ENST00000547562 CALHM2Q9HA72 323 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 DNAJB11Q9UBS4 358 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 GLS2Q9UI32 602 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 SHANK1Q9Y566 2161 aa13.42□□□□□ -0.26
BRF1-212ENST00000547562 FGF16O43320 207 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 RBM11P57052 281 aaKnown RBP13.41□□□□□ -0.26
BRF1-212ENST00000547562 S100A10P60903 97 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 AIMP2Q13155 320 aaKnown RBP13.41□□□□□ -0.26
BRF1-212ENST00000547562 BTN1A1Q13410 526 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 LINC00696Q6ZRV3 163 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 ZNF611Q8N823 705 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 SPERTQ8NA61 448 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 FNDC9Q8TBE3 224 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 PCDHB10Q9UN67 800 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 CDX4O14627 284 aaPredicted RBP13.41□□□□□ -0.26
BRF1-212ENST00000547562 PDCD6O75340 191 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 MT-CO3P00414 261 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 MALLQ13021 153 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 TMEM251Q8N6I4 163 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 MARS2Q96GW9 593 aaKnown RBP13.41□□□□□ -0.26
BRF1-212ENST00000547562 LOXL4Q96JB6 756 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 PIGMQ9H3S5 423 aa13.41□□□□□ -0.26
BRF1-212ENST00000547562 ARHGAP21Q5T5U3 1957 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 FAM221AA4D161 298 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 HLA-HP01893 362 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 ZNF728P0DKX0 622 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 CCNOP22674 350 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 PIGPP57054 158 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 IAH1Q2TAA2 248 aaPredicted RBP13.4□□□□□ -0.26
BRF1-212ENST00000547562 ZNF585AQ6P3V2 769 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 SLC22A25Q6T423 547 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 CCDC36Q8IYA8 594 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 OR1S2Q8NGQ3 325 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 TOMM40LQ969M1 308 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 REPIN1Q9BWE0 567 aaKnown RBP13.4□□□□□ -0.26
BRF1-212ENST00000547562 TMEM100Q9NV29 134 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 TNRC6AQ8NDV7 1962 aaKnown RBP13.4□□□□□ -0.26
BRF1-212ENST00000547562 ZNF205O95201 554 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 FOXG1P55316 489 aaPredicted RBP13.4□□□□□ -0.26
BRF1-212ENST00000547562 TFAP2EQ6VUC0 442 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 SLC25A26Q70HW3 274 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 OR56B2PQ8NGI1 322 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 SLC5A7Q9GZV3 580 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 ZNF286AQ9HBT8 521 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 ASF1BQ9NVP2 202 aa13.4□□□□□ -0.26
BRF1-212ENST00000547562 C5orf49A4QMS7 147 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 ZNF724A8MTY0 619 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 APOC3P02656 99 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 FUT3P21217 361 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 TAGLNQ01995 201 aaKnown RBP13.39□□□□□ -0.27
BRF1-212ENST00000547562 PLGLB1Q02325 96 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 DAZAP2Q15038 168 aaPredicted RBP13.39□□□□□ -0.27
BRF1-212ENST00000547562 PDCD1Q15116 288 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 RNF141Q8WVD5 230 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 TMED6Q8WW62 240 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 MARC2Q969Z3 335 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 CNTNAP3BQ96NU0 1288 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 PAPOLGQ9BWT3 736 aaKnown RBP13.39□□□□□ -0.27
BRF1-212ENST00000547562 CNTNAP3Q9BZ76 1288 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 PRRG4Q9BZD6 226 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 C12orf4Q9NQ89 552 aa13.39□□□□□ -0.27
BRF1-212ENST00000547562 IL17BQ9UHF5 180 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms