RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 FAM216AQ8WUB2 273 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 RGP1Q92546 391 aaPredicted RBP9.78□□□□□ -0.84
YBX3-217ENST00000546164 ZNF48Q96MX3 618 aaPredicted RBP9.78□□□□□ -0.84
YBX3-217ENST00000546164 FAM234AQ9H0X4 552 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 ZCCHC4Q9H5U6 513 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 UNKLQ9H9P5 680 aaKnown RBP9.78□□□□□ -0.84
YBX3-217ENST00000546164 NEK6Q9HC98 313 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 ESM1Q9NQ30 184 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 CHCHD3Q9NX63 227 aaKnown RBP9.78□□□□□ -0.84
YBX3-217ENST00000546164 CLEC2DQ9UHP7 191 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 DHDHQ9UQ10 334 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 IGHV3OR16-10A0A075B7F0 116 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 CENPVL3A0A0U1RRI6 287 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 F8VVB4 439 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 F8VWA3 439 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 CLDN34H7C241 214 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 M0R1W7 72 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 SLC1A7O00341 560 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 XPNPEP2O43895 674 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 RGS9O75916 674 aaPredicted RBP9.77□□□□□ -0.85
YBX3-217ENST00000546164 NDUFB7P17568 137 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 MTCP1P56278 107 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 PDZK1IP1Q13113 114 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 ZNF529Q6P280 563 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 CRIP3Q6Q6R5 217 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 METAP1DQ6UB28 335 aaPredicted RBP9.77□□□□□ -0.85
YBX3-217ENST00000546164 OR5D14Q8NGL3 314 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 GPR148Q8TDV2 347 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 H1FXQ92522 213 aaKnown RBP9.77□□□□□ -0.85
YBX3-217ENST00000546164 SLAMF9Q96A28 289 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 SMIM19Q96E16 107 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 ZMAT3Q9HA38 289 aaKnown RBP9.77□□□□□ -0.85
YBX3-217ENST00000546164 FKBP14Q9NWM8 211 aa9.77□□□□□ -0.85
YBX3-217ENST00000546164 IGHV1-69DA0A0B4J2H0 117 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 K7N7A8 449 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 SULT1B1O43704 296 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 ZNF737O75373 536 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 CYB5AP00167 134 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 LALBAP00709 142 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 IGHV1-69P01742 117 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 TK1P04183 234 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 CHRM2P08172 466 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 OCM2P0CE71 109 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 OCMP0CE72 109 aaPredicted RBP9.76□□□□□ -0.85
YBX3-217ENST00000546164 POU3F4P49335 361 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 AQP4P55087 323 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 UBA52P62987 128 aaKnown RBP9.76□□□□□ -0.85
YBX3-217ENST00000546164 RNLSQ5VYX0 342 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 DMKNQ6E0U4 476 aaPredicted RBP9.76□□□□□ -0.85
YBX3-217ENST00000546164 ASPHD2Q6ICH7 369 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 BRD3OSQ6XYD6 125 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 VMO1Q7Z5L0 202 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 SAXO1Q8IYX7 474 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 Q8N7P7 452 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.76□□□□□ -0.85
YBX3-217ENST00000546164 TSEN15Q8WW01 171 aaKnown RBP9.76□□□□□ -0.85
YBX3-217ENST00000546164 GATAD2BQ8WXI9 593 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 TNFRSF14Q92956 283 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 RHOFQ9HBH0 211 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 ONECUT1Q9UBC0 465 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 ZNF281Q9Y2X9 895 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 SIRT4Q9Y6E7 314 aaPredicted RBP9.76□□□□□ -0.85
YBX3-217ENST00000546164 TENM1Q9UKZ4 2725 aa9.76□□□□□ -0.85
YBX3-217ENST00000546164 KDM4BO94953 1096 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 CD2P06729 351 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 RAB3AP20336 220 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 PRTN3P24158 256 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 C21orf33P30042 268 aaPredicted RBP9.75□□□□□ -0.85
YBX3-217ENST00000546164 NPBWR2P48146 333 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 CEBPDP49716 269 aaPredicted RBP9.75□□□□□ -0.85
YBX3-217ENST00000546164 CAPZA1P52907 286 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 TAS2R43P59537 309 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 ZP1P60852 638 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 COL10A1Q03692 680 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 ZNF146Q15072 292 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 KISS1Q15726 138 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 FIP1L1Q6UN15 594 aaKnown RBP9.75□□□□□ -0.85
YBX3-217ENST00000546164 AHSA2Q719I0 299 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 FAM58AQ8N1B3 248 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 BATF2Q8N1L9 274 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 ZSCAN4Q8NAM6 433 aaPredicted RBP9.75□□□□□ -0.85
YBX3-217ENST00000546164 BPIFB6Q8NFQ5 453 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 TBC1D15Q8TC07 691 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 EMG1Q92979 244 aaKnown RBP9.75□□□□□ -0.85
YBX3-217ENST00000546164 LHX4Q969G2 390 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 PGLYRP3Q96LB9 341 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 C1orf147Q96MC9 270 aaPredicted RBP9.75□□□□□ -0.85
YBX3-217ENST00000546164 VCX3BQ9H321 246 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 METTL8Q9H825 291 aaKnown RBP9.75□□□□□ -0.85
YBX3-217ENST00000546164 ELL3Q9HB65 397 aaPredicted RBP9.75□□□□□ -0.85
YBX3-217ENST00000546164 HMG20AQ9NP66 347 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 NOX4Q9NPH5 578 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 RBFOX1Q9NWB1 397 aaKnown RBP9.75□□□□□ -0.85
YBX3-217ENST00000546164 OR14J1Q9UGF5 321 aa9.75□□□□□ -0.85
YBX3-217ENST00000546164 SOX21Q9Y651 276 aaPredicted RBP9.75□□□□□ -0.85
YBX3-217ENST00000546164 IGKV1-12A0A0C4DH73 117 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 TRBV5-5A0A0J9YX44 114 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 A0A1W2PPH5 198 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 A0A1W2PQ09 198 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 DNAJC9-AS1A6NH13 148 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms