RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ZDHHC8Q9ULC8 765 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 A0A087WWC5 75 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 TERTO14746 1132 aaKnown RBP7.62□□□□□ -1.19
TDP1-204ENST00000545686 PPIHO43447 177 aaKnown RBP7.62□□□□□ -1.19
TDP1-204ENST00000545686 GATCO43716 136 aaKnown RBP7.62□□□□□ -1.19
TDP1-204ENST00000545686 PITX3O75364 302 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 DKK1O94907 266 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 VAMP5O95183 116 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 FBP1P09467 338 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 SFTPDP35247 375 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 MTCP1P56278 107 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 RPS23P62266 143 aaKnown RBP7.62□□□□□ -1.19
TDP1-204ENST00000545686 H3F3AP84243 136 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 GNMTQ14749 295 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 SHBQ15464 509 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 RSPO1Q2MKA7 263 aaPredicted RBP7.62□□□□□ -1.19
TDP1-204ENST00000545686 NKAIN1Q4KMZ8 207 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 HIKESHIQ53FT3 197 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 SOHLH1Q5JUK2 328 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 LYZL2Q7Z4W2 148 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 FAM185AQ8N0U4 392 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 SUMF2Q8NBJ7 301 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 OR4D5Q8NGN0 318 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 CD300LFQ8TDQ1 290 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 TOMM40LQ969M1 308 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 SPACA9Q96E40 222 aaPredicted RBP7.62□□□□□ -1.19
TDP1-204ENST00000545686 BOD1Q96IK1 185 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 FAAP24Q9BTP7 215 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 C20orf24Q9BUV8 137 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 TPSD1Q9BZJ3 242 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 SH3BGRL3Q9H299 93 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 ZNF286AQ9HBT8 521 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 IL36GQ9NZH8 169 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 PTRH2Q9Y3E5 179 aaKnown RBP7.62□□□□□ -1.19
TDP1-204ENST00000545686 MTCH2Q9Y6C9 303 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 TRAV20A0A0B4J274 112 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 A0A1W2PPE2 198 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 OR5H15A6NDH6 313 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 WRBO00258 174 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 XRCC2O43543 280 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 OR2C1O95371 312 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 DIRAS3O95661 229 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 CYC1P08574 325 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 NQO2P16083 231 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 AFF3P51826 1226 aaKnown RBP7.61□□□□□ -1.19
TDP1-204ENST00000545686 TGIF1Q15583 401 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 TMEM176BQ3YBM2 270 aaPredicted RBP7.61□□□□□ -1.19
TDP1-204ENST00000545686 FAM69BQ5VUD6 431 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 LHFPL2Q6ZUX7 228 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 CPEB2Q7Z5Q1 589 aaKnown RBP7.61□□□□□ -1.19
TDP1-204ENST00000545686 INTS12Q96CB8 462 aaKnown RBP7.61□□□□□ -1.19
TDP1-204ENST00000545686 POM121Q96HA1 1249 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 RSRP1Q9BUV0 290 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 C11orf1Q9H5F2 150 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 TINAGQ9UJW2 476 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 RCL1Q9Y2P8 373 aaKnown RBP7.61□□□□□ -1.19
TDP1-204ENST00000545686 FBXO7Q9Y3I1 522 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 BRWD1Q9NSI6 2320 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 ASCC3Q8N3C0 2202 aaKnown RBP7.61□□□□□ -1.19
TDP1-204ENST00000545686 DHHO43323 396 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 ONECUT2O95948 504 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 DAOP14920 347 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 FHITP49789 147 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 FOXL2P58012 376 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 RAB2AP61019 212 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 EWSR1Q01844 656 aaKnown RBP eCLIP7.61□□□□□ -1.19
TDP1-204ENST00000545686 RAB30Q15771 203 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 SP6Q3SY56 376 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 ADAM5Q6NVV9 412 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 TMEM182Q6ZP80 229 aaPredicted RBP7.61□□□□□ -1.19
TDP1-204ENST00000545686 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.61□□□□□ -1.19
TDP1-204ENST00000545686 TMEM123Q8N131 208 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 WDSUB1Q8N9V3 476 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 HSD17B11Q8NBQ5 300 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 SMRP1Q8NCR6 262 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 OR52M1Q8NGK5 317 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 FAM213BQ8TBF2 198 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 FBXO17Q96EF6 278 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 SPIN2AQ99865 258 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 SPIN2BQ9BPZ2 258 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 HIPK2Q9H2X6 1198 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 GPR173Q9NS66 373 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 KIAA1456Q9P272 454 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 ZNF391Q9UJN7 358 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 NXT1Q9UKK6 140 aaKnown RBP7.61□□□□□ -1.19
TDP1-204ENST00000545686 SHANK1Q9Y566 2161 aa7.61□□□□□ -1.19
TDP1-204ENST00000545686 C1QL1O75973 258 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 OR2J2O76002 312 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 OPN1LWP04000 364 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 ARG1P05089 322 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 CRYGSP22914 178 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 PPP1CCP36873 323 aaKnown RBP7.6□□□□□ -1.19
TDP1-204ENST00000545686 OR2B8PP59922 312 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 HERV-K104P61576 105 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 MRPS34P82930 218 aaKnown RBP7.6□□□□□ -1.19
TDP1-204ENST00000545686 RAB35Q15286 201 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 TAF9Q16594 264 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 DMRTC1Q5HYR2 192 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 SLC22A25Q6T423 547 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 CLEC9AQ6UXN8 241 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms