RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 CDS2O95674 445 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 GLAP06280 429 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 CELA2AP08217 269 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 CCL4P13236 92 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 ACKR3P25106 362 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 RGS19P49795 217 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 TMEM187Q14656 261 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 PEA15Q15121 130 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 TMEM268Q5VZI3 342 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 ATRAIDQ6UW56 229 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 C6orf15Q6UXA7 325 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-223ENST00000544669 PUSL1Q8N0Z8 303 aaKnown RBP11.32□□□□□ -0.6
CPSF7-223ENST00000544669 OR10D3Q8NH80 312 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 ADGRG7Q96K78 797 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 ARV1Q9H2C2 271 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 PLK3Q9H4B4 646 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 LUZP4Q9P127 313 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 TCFL5Q9UL49 500 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 STARD10Q9Y365 291 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 IGKV3D-15A0A087WSY6 115 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 CXCL13O43927 109 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 FBXO24O75426 580 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 ACTL6AO96019 429 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 S100GP29377 79 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 TMEM33P57088 247 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 CEACAM16Q2WEN9 425 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 ACER2Q5QJU3 275 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 PLCXD3Q63HM9 321 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 RPL7L1Q6DKI1 246 aaKnown RBP11.32□□□□□ -0.6
CPSF7-223ENST00000544669 SLC23A3Q6PIS1 610 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 LINC00596Q86U02 117 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 RTN4RL2Q86UN3 420 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 LFNGQ8NES3 379 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 OR10Z1Q8NGY1 313 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 OR51F2Q8NH61 342 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 LYPD6BQ8NI32 183 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 GTF3AQ92664 365 aaKnown RBP11.32□□□□□ -0.6
CPSF7-223ENST00000544669 RSRP1Q9BUV0 290 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 HRH4Q9H3N8 390 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 RNF122Q9H9V4 155 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 SPACA1Q9HBV2 294 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 RCC2Q9P258 522 aaKnown RBP11.32□□□□□ -0.6
CPSF7-223ENST00000544669 BRWD1Q9NSI6 2320 aa11.32□□□□□ -0.6
CPSF7-223ENST00000544669 KIR2DS1A0A191URI9 304 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 PMS2P1A4D2B8 440 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 C5orf63A6NC05 138 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 RPL36A-HNRNPH2H7BZ11 118 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 LRP3O75074 770 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 MRPL33O75394 65 aaKnown RBP11.31□□□□□ -0.6
CPSF7-223ENST00000544669 TRAPPC6AO75865 159 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 ZNF883P0CG24 379 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 ACP1P24666 158 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 PAX6P26367 422 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 KIR2DS4P43632 304 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 RBM11P57052 281 aaKnown RBP11.31□□□□□ -0.6
CPSF7-223ENST00000544669 FOXO1Q12778 655 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 KIR2DS1Q14954 304 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 MPV17LQ2QL34 196 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 BTNL8Q6UX41 500 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 PPP1R32Q7Z5V6 425 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 YRDCQ86U90 279 aaKnown RBP11.31□□□□□ -0.6
CPSF7-223ENST00000544669 MKXQ8IYA7 352 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 FBXL14Q8N1E6 418 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 OR10AD1Q8NGE0 317 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 MAFIPQ8WZ33 124 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 ROBO4Q8WZ75 1007 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 C18orf12Q96KH6 178 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 NRIP2Q9BQI9 281 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 PBDC1Q9BVG4 233 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 WNT5BQ9H1J7 359 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 PRO3102Q9H379 93 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 ZNF442Q9H7R0 627 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 LAMA3Q16787 3333 aa11.31□□□□□ -0.6
CPSF7-223ENST00000544669 NUPL2O15504 423 aaKnown RBP11.3□□□□□ -0.6
CPSF7-223ENST00000544669 SPRY1O43609 319 aaPredicted RBP11.3□□□□□ -0.6
CPSF7-223ENST00000544669 CD5P06127 495 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 B4GALT1P15291 398 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 GDF1P27539 372 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 ARR3P36575 388 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 RND3P61587 244 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 MST1LQ2TV78 715 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 COLCA1Q6ZS62 124 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 OR2AE1Q8NHA4 323 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 FAM173AQ9BQD7 235 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 SULT4A1Q9BR01 284 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 DDA1Q9BW61 102 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 SLC2A9Q9NRM0 540 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 FBXL17Q9UF56 701 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 NOSIPQ9Y314 301 aaKnown RBP11.3□□□□□ -0.6
CPSF7-223ENST00000544669 LSM5Q9Y4Y9 91 aaKnown RBP11.3□□□□□ -0.6
CPSF7-223ENST00000544669 IGKV1D-8A0A087WSZ0 117 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 FAM74A7A6NL05 159 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 G3V3Y1 287 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 GPR31O00270 319 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 ANGPTL7O43827 346 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 SYNGR4O95473 234 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 TSPAN15O95858 294 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 TK1P04183 234 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 TDGF1P13385 188 aa11.3□□□□□ -0.6
CPSF7-223ENST00000544669 MMP9P14780 707 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms