RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 SCN3BQ9NY72 215 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 CNOT2Q9NZN8 540 aaKnown RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF69Q9UC07 566 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 OR14J1Q9UGF5 321 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 PITPNC1Q9UKF7 332 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 TENM1Q9UKZ4 2725 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 TRGV10A0A0A0MS01 117 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 MEIOCA2RUB1 952 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 C5orf63A6NC05 138 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 H0YJX3 145 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 K7N7A8 449 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 MGST3O14880 152 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 SULT1B1O43704 296 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 SRSF10O75494 262 aaKnown RBP4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 RHBDL1O75783 438 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 VENTXO95231 258 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 APOL3O95236 402 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 IGHA1P01876 353 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 CSTBP04080 98 aaKnown RBP4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 TMEM225BP0DP42 221 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 HKR1P10072 659 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 ATF1P18846 271 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 GABRR1P24046 479 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 AZGP1P25311 298 aaKnown RBP4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 CFPP27918 469 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 CAPGP40121 348 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 KCNJ3P48549 501 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 POU3F4P49335 361 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 EDDM3BP56851 147 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 ISL1P61371 349 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 GABPB1Q06547 395 aaPredicted RBP4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 PDZK1IP1Q13113 114 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 RSU1Q15404 277 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 AANATQ16613 207 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF691Q5VV52 312 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 C11orf88Q6PI97 169 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 Q6YL49 198 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 LIAT1Q6ZQX7 453 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 C17orf107Q6ZR85 190 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 C1orf229Q6ZS94 237 aaPredicted RBP4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 SLC25A26Q70HW3 274 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 LINC00596Q86U02 117 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 LHFPL3Q86UP9 236 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 OR8H2Q8N162 312 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 PARP16Q8N5Y8 322 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF565Q8N9K5 539 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNRF1Q8ND25 227 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 OR52N1Q8NH53 320 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 CAPSLQ8WWF8 208 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 MYDGFQ969H8 173 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 FGGYQ96C11 551 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 PELI1Q96FA3 418 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 GAFA1Q96PS6 74 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 MBOAT4Q96T53 435 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 KRTAP17-1Q9BYP8 105 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 BARHL1Q9BZE3 327 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 WDR13Q9H1Z4 485 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 RASSF4Q9H2L5 321 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 PRDM13Q9H4Q3 707 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 ELL3Q9HB65 397 aaPredicted RBP4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 SPACA1Q9HBV2 294 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 SMURF1Q9HCE7 757 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 EXOSC4Q9NPD3 245 aaKnown RBP4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 ABCB10Q9NRK6 738 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 BABAM2Q9NXR7 383 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 FRRS1LQ9P0K9 344 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 CTSZQ9UBR2 303 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 BLOC1S6Q9UL45 172 aa4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 DIMT1Q9UNQ2 313 aaKnown RBP4.63□□□□□ -1.67
CLSTN3-215ENST00000544584 IGKV1D-17A0A075B6S4 117 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 CENPVL3A0A0U1RRI6 287 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 A0A1B0GTI1 187 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 MEGF11A6BM72 1044 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 DNAJC9-AS1A6NH13 148 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 J3QRE1 110 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 NPFFO15130 113 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 ANGPTL7O43827 346 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 RGS9O75916 674 aaPredicted RBP4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 HAND1O96004 215 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 TK1P04183 234 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 ALDOBP05062 364 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 IGHV4-38-2P0DP08 117 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 PIPP12273 146 aaPredicted RBP4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 MMP9P14780 707 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 GABRB1P18505 474 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 ERP29P30040 261 aaKnown RBP4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 C21orf33P30042 268 aaPredicted RBP4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 TGFBR2P37173 567 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 CEACAM3P40198 252 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 MTNR1BP49286 362 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 PRRX1P54821 245 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF85Q03923 595 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 SLC34A1Q06495 639 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF146Q15072 292 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 SLC9A3R2Q15599 337 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 KISS1Q15726 138 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 UBE2V2Q15819 145 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 GRK1Q15835 563 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 DGUOKQ16854 277 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms