RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 USB1Q9BQ65 265 aaKnown RBP16.92■□□□□ 0.3
COPS7A-218ENST00000543939 FAAP24Q9BTP7 215 aa16.92■□□□□ 0.3
COPS7A-218ENST00000543939 BEX2Q9BXY8 128 aa16.92■□□□□ 0.3
COPS7A-218ENST00000543939 BEX1Q9HBH7 125 aa16.92■□□□□ 0.3
COPS7A-218ENST00000543939 SCP2D1Q9UJQ7 156 aa16.92■□□□□ 0.3
COPS7A-218ENST00000543939 LRP5LA4QPB2 252 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 A8MV72 311 aaPredicted RBP16.91■□□□□ 0.3
COPS7A-218ENST00000543939 J3QT63 122 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 PDCD6O75340 191 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 NKPD1Q17RQ9 610 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 ATAD3CQ5T2N8 411 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 TMEM211Q6ICI0 200 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 ALKBH2Q6NS38 261 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 IDO2Q6ZQW0 420 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 C22orf34Q6ZV56 151 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 BATF2Q8N1L9 274 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 OR4K15Q8NH41 348 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 RND1Q92730 232 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 HS3ST6Q96QI5 342 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 SLC25A21Q9BQT8 299 aaPredicted RBP16.91■□□□□ 0.3
COPS7A-218ENST00000543939 SULT4A1Q9BR01 284 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 TMEM100Q9NV29 134 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 ZNF221Q9UK13 617 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 CACNA1AO00555 2505 aa16.91■□□□□ 0.3
COPS7A-218ENST00000543939 PRSS44E7EML9 344 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 C16orf97H3BN30 126 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 IL5P05113 134 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 GCH1P30793 250 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 EIF2B2P49770 351 aaKnown RBP16.9■□□□□ 0.3
COPS7A-218ENST00000543939 FABP6P51161 128 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 CBX3Q13185 183 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 ZMYND11Q15326 602 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 MICBQ29980 383 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 ACTBL2Q562R1 376 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 ST6GALNAC3Q8NDV1 305 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 BEST4Q8NFU0 473 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 PRRT1Q99946 306 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 AK3Q9UIJ7 227 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 MEMO1Q9Y316 297 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 CRYAAP02489 173 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 PMP2P02689 132 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 HPXP02790 462 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 CSN2P05814 226 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 ANXA7P20073 488 aaKnown RBP16.9■□□□□ 0.3
COPS7A-218ENST00000543939 FUT3P21217 361 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 OR8G1Q15617 311 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 METTL11BQ5VVY1 283 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 GLDNQ6ZMI3 551 aaPredicted RBP16.9■□□□□ 0.3
COPS7A-218ENST00000543939 SLC36A1Q7Z2H8 476 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 OR13C8Q8NGS7 320 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 MED30Q96HR3 178 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 ST6GALNAC5Q9BVH7 336 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 MED28Q9H204 178 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 ZNF230Q9UIE0 474 aaPredicted RBP16.9■□□□□ 0.3
COPS7A-218ENST00000543939 FZR1Q9UM11 496 aa16.9■□□□□ 0.3
COPS7A-218ENST00000543939 TRGV8A0A0C4DH27 118 aa16.89■□□□□ 0.29
COPS7A-218ENST00000543939 H0YL77 283 aa16.89■□□□□ 0.29
COPS7A-218ENST00000543939 MLNRO43193 412 aa16.89■□□□□ 0.29
COPS7A-218ENST00000543939 TIMM8AO60220 97 aaPredicted RBP16.89■□□□□ 0.29
COPS7A-218ENST00000543939 AMY2BP19961 511 aa16.89■□□□□ 0.29
COPS7A-218ENST00000543939 PMELP40967 661 aa16.89■□□□□ 0.29
COPS7A-218ENST00000543939 PDCD1Q15116 288 aa16.89■□□□□ 0.29
COPS7A-218ENST00000543939 VAX1Q5SQQ9 334 aa16.89■□□□□ 0.29
COPS7A-218ENST00000543939 CD276Q5ZPR3 534 aa16.89■□□□□ 0.29
COPS7A-218ENST00000543939 RGS7BPQ6MZT1 257 aaPredicted RBP16.89■□□□□ 0.29
COPS7A-218ENST00000543939 HDHD3Q9BSH5 251 aaPredicted RBP16.89■□□□□ 0.29
COPS7A-218ENST00000543939 RANGRFQ9HD47 186 aaPredicted RBP16.89■□□□□ 0.29
COPS7A-218ENST00000543939 TMEM210A6NLX4 147 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 RHBDL1O75783 438 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 OR7C1O76099 320 aaPredicted RBP16.88■□□□□ 0.29
COPS7A-218ENST00000543939 VSIG10L2P0DP72 767 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 SFTPCP11686 197 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 CA7P43166 264 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 CASP6P55212 293 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 SNU13P55769 128 aaKnown RBP16.88■□□□□ 0.29
COPS7A-218ENST00000543939 NKX6-1P78426 367 aaPredicted RBP16.88■□□□□ 0.29
COPS7A-218ENST00000543939 CD83Q01151 205 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 FCN2Q15485 313 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 SCGB2B2Q4G0G5 96 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
COPS7A-218ENST00000543939 DRAXINQ8NBI3 349 aaPredicted RBP16.88■□□□□ 0.29
COPS7A-218ENST00000543939 SCCPDHQ8NBX0 429 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 ZNF488Q96MN9 340 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 CMSS1Q9BQ75 279 aaKnown RBP16.88■□□□□ 0.29
COPS7A-218ENST00000543939 RHOFQ9HBH0 211 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 SPEF1Q9Y4P9 236 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 PCNX1Q96RV3 2341 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 CHD8Q9HCK8 2581 aa16.88■□□□□ 0.29
COPS7A-218ENST00000543939 A0A1B0GWJ7 208 aa16.87■□□□□ 0.29
COPS7A-218ENST00000543939 RLN1P04808 185 aa16.87■□□□□ 0.29
COPS7A-218ENST00000543939 DTYMKP23919 212 aa16.87■□□□□ 0.29
COPS7A-218ENST00000543939 ZNF154Q13106 437 aa16.87■□□□□ 0.29
COPS7A-218ENST00000543939 MSMPQ1L6U9 139 aa16.87■□□□□ 0.29
COPS7A-218ENST00000543939 MPV17LQ2QL34 196 aa16.87■□□□□ 0.29
COPS7A-218ENST00000543939 BRICD5Q6PL45 260 aa16.87■□□□□ 0.29
COPS7A-218ENST00000543939 Q6ZR03 302 aa16.87■□□□□ 0.29
COPS7A-218ENST00000543939 MRGPRFQ96AM1 343 aa16.87■□□□□ 0.29
COPS7A-218ENST00000543939 DACT3Q96B18 629 aaPredicted RBP16.87■□□□□ 0.29
COPS7A-218ENST00000543939 FYTTD1Q96QD9 318 aaKnown RBP16.87■□□□□ 0.29
COPS7A-218ENST00000543939 SEC22CQ9BRL7 303 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms