RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 ZNF273Q14593 569 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 ODF4Q2M2E3 257 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 OR8H2Q8N162 312 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 FAM110DQ8TAY7 271 aaPredicted RBP10.66□□□□□ -0.7
RTN3-213ENST00000543552 RPS4Y2Q8TD47 263 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 C17orf50Q8WW18 174 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 RORBQ92753 470 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 CENPNQ96H22 339 aaPredicted RBP10.66□□□□□ -0.7
RTN3-213ENST00000543552 RIBC2Q9H4K1 309 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 IMPAD1Q9NX62 359 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 GLS2Q9UI32 602 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 ORC6Q9Y5N6 252 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 TET2Q6N021 2002 aaPredicted RBP10.65□□□□□ -0.7
RTN3-213ENST00000543552 LOC107986453A0A1B0GWG9 222 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 hADV38S2A0JD32 116 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 C17orf98A8MV24 154 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 ARG1P05089 322 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 OCM2P0CE71 109 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 OCMP0CE72 109 aaPredicted RBP10.65□□□□□ -0.7
RTN3-213ENST00000543552 RBP2P50120 134 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 ACTC1P68032 377 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 ACTA1P68133 377 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 ZNF782Q6ZMW2 699 aaPredicted RBP10.65□□□□□ -0.7
RTN3-213ENST00000543552 SLC25A26Q70HW3 274 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 SSX6Q7RTT6 188 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 AMIGO2Q86SJ2 522 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 BATF2Q8N1L9 274 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 C11orf42Q8N5U0 333 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 DNAAF1Q8NEP3 725 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 TRUB1Q8WWH5 349 aaKnown RBP10.65□□□□□ -0.7
RTN3-213ENST00000543552 EMG1Q92979 244 aaKnown RBP10.65□□□□□ -0.7
RTN3-213ENST00000543552 MALSU1Q96EH3 234 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 AJUBAQ96IF1 538 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 ZNF714Q96N38 554 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 MYCBPQ99417 103 aaPredicted RBP10.65□□□□□ -0.7
RTN3-213ENST00000543552 SEBOXQ9HB31 216 aaPredicted RBP10.65□□□□□ -0.7
RTN3-213ENST00000543552 GNG8Q9UK08 70 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 OAZ3Q9UMX2 235 aa10.65□□□□□ -0.7
RTN3-213ENST00000543552 PRKDCP78527 4128 aaKnown RBP10.65□□□□□ -0.71
RTN3-213ENST00000543552 FAM90A8PA6NJQ4 464 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 SNTNA6NMZ2 147 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 ZNF737O75373 536 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 ZNF20P17024 532 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 PRKACBP22694 351 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 PEX2P28328 305 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 ATP1B3P54709 279 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 OR12D2P58182 307 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 UBE2V2Q15819 145 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 TMEM244Q5VVB8 128 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 CRIP3Q6Q6R5 217 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 ZBTB49Q6ZSB9 765 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 KCTD20Q7Z5Y7 419 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 EGFL6Q8IUX8 553 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 KLHDC1Q8N7A1 406 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 PPP1R35Q8TAP8 253 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 SLAMF9Q96A28 289 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 MRPL48Q96GC5 212 aaKnown RBP10.64□□□□□ -0.71
RTN3-213ENST00000543552 SNX22Q96L94 193 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 NKX3-1Q99801 234 aaPredicted RBP10.64□□□□□ -0.71
RTN3-213ENST00000543552 NEK6Q9HC98 313 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 MTCH1Q9NZJ7 389 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 PCDHGB5Q9Y5G0 923 aa10.64□□□□□ -0.71
RTN3-213ENST00000543552 A0A0G2JK05 382 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 ODF3BA8MYP8 253 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 APOL3O95236 402 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 HAND1O96004 215 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 ALDOBP05062 364 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 IGHV1-8P0DP01 117 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 GABRR1P24046 479 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 DLX6P56179 175 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 DYNC1I2Q13409 638 aaKnown RBP10.63□□□□□ -0.71
RTN3-213ENST00000543552 EDDM3AQ14507 147 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 GRK1Q15835 563 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 FAM189A2Q15884 450 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 SPIN3Q5JUX0 258 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 MINOS1Q5TGZ0 78 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 ZNF626Q68DY1 528 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 LHFPL2Q6ZUX7 228 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 OR11H6Q8NGC7 330 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 EME1Q96AY2 570 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 SPSB1Q96BD6 273 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 FAM53CQ9NYF3 392 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 TCF19Q9Y242 345 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 LINC00312Q9Y6C7 94 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 MINOS1-NBL1R4GNA1 71 aa10.63□□□□□ -0.71
RTN3-213ENST00000543552 IGKV1-27A0A075B6S5 117 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 TRBV2A0A0J9YWF9 115 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 FUOMA2VDF0 154 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 H3BSH0 61 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 F2RL2O00254 374 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 CHST1O43916 411 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 PEX14O75381 377 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 ISG15P05161 165 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 RPSAP08865 295 aaKnown RBP10.62□□□□□ -0.71
RTN3-213ENST00000543552 VSIG10L2P0DP72 767 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 DYNLT3P51808 116 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 ARHGDIBP52566 201 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 MTCP1P56278 107 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 ISL1P61371 349 aa10.62□□□□□ -0.71
RTN3-213ENST00000543552 ACTA2P62736 377 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms