RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 HIST1H2BOP23527 126 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 HIST1H2BBP33778 126 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 RGS19P49795 217 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 NOVA1P51513 510 aaKnown RBP20.69■□□□□ 0.9
SHD-201ENST00000543264 HIST1H2BDP58876 126 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 ERVFRD-1P60508 538 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 HIST1H2BCP62807 126 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 GRB2P62993 217 aaKnown RBP20.69■□□□□ 0.9
SHD-201ENST00000543264 EWSR1Q01844 656 aaKnown RBP eCLIP20.69■□□□□ 0.9
SHD-201ENST00000543264 HIST2H2BEQ16778 126 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.69■□□□□ 0.9
SHD-201ENST00000543264 OR1L3Q8NH93 324 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 HAS2Q92819 552 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 HIST1H2BHQ93079 126 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 C14orf144Q96I85 54 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 HIST1H2BNQ99877 126 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 HIST1H2BMQ99879 126 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 SDHAF3Q9NRP4 125 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 AK3Q9UIJ7 227 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 LIPGQ9Y5X9 500 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 SPAG17Q6Q759 2223 aa20.69■□□□□ 0.9
SHD-201ENST00000543264 H3BMH7 237 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 HSD17B6O14756 317 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 ANGPTL7O43827 346 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 RNF224P0DH78 156 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 ATP6V0CP27449 155 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 GNMTQ14749 295 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 TMEM176BQ3YBM2 270 aaPredicted RBP20.68■□□□□ 0.9
SHD-201ENST00000543264 BRICD5Q6PL45 260 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 OR11L1Q8NGX0 322 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 SUCNR1Q9BXA5 334 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 SMDT1Q9H4I9 107 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 UFSP2Q9NUQ7 469 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 LAMA1P25391 3075 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 CCDC187A0A096LP49 1063 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 FAM221AA4D161 298 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 CYB5BO43169 146 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 TRAF3IP2O43734 574 aaPredicted RBP20.68■□□□□ 0.9
SHD-201ENST00000543264 SPSB3Q6PJ21 355 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 ZNF429Q86V71 674 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 C20orf196Q8IYI0 205 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 DYRK2Q92630 601 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 UNKLQ9H9P5 680 aaKnown RBP20.68■□□□□ 0.9
SHD-201ENST00000543264 SLC2A9Q9NRM0 540 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 HS3ST3B1Q9Y662 390 aa20.68■□□□□ 0.9
SHD-201ENST00000543264 SPTBN5Q9NRC6 3674 aaKnown RBP20.67■□□□□ 0.9
SHD-201ENST00000543264 SEC14L6B5MCN3 397 aa20.67■□□□□ 0.9
SHD-201ENST00000543264 FOSL1P15407 271 aa20.67■□□□□ 0.9
SHD-201ENST00000543264 CPEB2Q7Z5Q1 589 aaKnown RBP20.67■□□□□ 0.9
SHD-201ENST00000543264 Q96M66 194 aa20.67■□□□□ 0.9
SHD-201ENST00000543264 SHANK1Q9Y566 2161 aa20.67■□□□□ 0.9
SHD-201ENST00000543264 A0A1B0GV90 55 aa20.67■□□□□ 0.9
SHD-201ENST00000543264 LILRA5A6NI73 299 aa20.67■□□□□ 0.9
SHD-201ENST00000543264 ATXN7O15265 892 aaPredicted RBP20.67■□□□□ 0.9
SHD-201ENST00000543264 PHF1O43189 567 aaPredicted RBP20.67■□□□□ 0.9
SHD-201ENST00000543264 TRGC2P03986 189 aa20.67■□□□□ 0.9
SHD-201ENST00000543264 SOD3P08294 240 aa20.67■□□□□ 0.9
SHD-201ENST00000543264 SRP19P09132 144 aaKnown RBP20.67■□□□□ 0.9
SHD-201ENST00000543264 ZNF41P51814 821 aaPredicted RBP20.67■□□□□ 0.9
SHD-201ENST00000543264 ZNF133P52736 654 aaPredicted RBP20.67■□□□□ 0.9
SHD-201ENST00000543264 SSTP61278 116 aa20.67■□□□□ 0.9
SHD-201ENST00000543264 MRPS21P82921 87 aaKnown RBP20.67■□□□□ 0.9
SHD-201ENST00000543264 MEX3BQ6ZN04 569 aaKnown RBP20.67■□□□□ 0.9
SHD-201ENST00000543264 LGI3Q8N145 548 aa20.67■□□□□ 0.9
SHD-201ENST00000543264 SNIP1Q8TAD8 396 aaKnown RBP20.67■□□□□ 0.9
SHD-201ENST00000543264 MSI2Q96DH6 328 aaKnown RBP20.67■□□□□ 0.9
SHD-201ENST00000543264 MVB12AQ96EY5 273 aa20.67■□□□□ 0.9
SHD-201ENST00000543264 KLRF1Q9NZS2 232 aa20.67■□□□□ 0.9
SHD-201ENST00000543264 ASXL3Q9C0F0 2248 aa20.66■□□□□ 0.9
SHD-201ENST00000543264 CXorf65A6NEN9 183 aa20.66■□□□□ 0.9
SHD-201ENST00000543264 ZNF726A6NNF4 738 aa20.66■□□□□ 0.9
SHD-201ENST00000543264 DHRS3O75911 302 aa20.66■□□□□ 0.9
SHD-201ENST00000543264 F10P00742 488 aa20.66■□□□□ 0.9
SHD-201ENST00000543264 HIST1H1BP16401 226 aaKnown RBP20.66■□□□□ 0.9
SHD-201ENST00000543264 BOD1Q96IK1 185 aa20.66■□□□□ 0.9
SHD-201ENST00000543264 PIAS3Q9Y6X2 628 aa20.66■□□□□ 0.9
SHD-201ENST00000543264 PPP1R2P9O14990 202 aa20.66■□□□□ 0.9
SHD-201ENST00000543264 DBHP09172 617 aa20.66■□□□□ 0.9
SHD-201ENST00000543264 LRTM2Q8N967 370 aa20.66■□□□□ 0.9
SHD-201ENST00000543264 SUMF1Q8NBK3 374 aa20.66■□□□□ 0.9
SHD-201ENST00000543264 ZDHHC12Q96GR4 267 aa20.66■□□□□ 0.9
SHD-201ENST00000543264 COL5A1P20908 1838 aaPredicted RBP20.66■□□□□ 0.9
SHD-201ENST00000543264 UNC13CQ8NB66 2214 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 OR5H15A6NDH6 313 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 SFTPDP35247 375 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 RSU1Q15404 277 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 SSX9Q7RTT3 188 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 OR2C3Q8N628 320 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 CYB561D1Q8N8Q1 229 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 GPR173Q9NS66 373 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 TMED3Q9Y3Q3 217 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 ZNF587BE7ETH6 402 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 SPRY1O43609 319 aaPredicted RBP20.65■□□□□ 0.9
SHD-201ENST00000543264 MTCP1P56278 107 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 NKX6-1P78426 367 aaPredicted RBP20.65■□□□□ 0.9
SHD-201ENST00000543264 GAMTQ14353 236 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 PP6455Q8WZ26 134 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 HSF4Q9ULV5 492 aa20.65■□□□□ 0.9
SHD-201ENST00000543264 ONECUT2O95948 504 aa20.64■□□□□ 0.9
SHD-201ENST00000543264 KHDC3LQ587J8 217 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms