RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 ZP1P60852 638 aa15.25■□□□□ 0.03
COPS7A-216ENST00000543170 PPP3R1P63098 170 aa15.25■□□□□ 0.03
COPS7A-216ENST00000543170 PAX8Q06710 450 aa15.25■□□□□ 0.03
COPS7A-216ENST00000543170 KISS1Q15726 138 aa15.25■□□□□ 0.03
COPS7A-216ENST00000543170 C1orf229Q6ZS94 237 aaPredicted RBP15.25■□□□□ 0.03
COPS7A-216ENST00000543170 C1QL2Q7Z5L3 287 aa15.25■□□□□ 0.03
COPS7A-216ENST00000543170 MS4A15Q8N5U1 240 aa15.25■□□□□ 0.03
COPS7A-216ENST00000543170 OR51A2Q8NGJ7 313 aa15.25■□□□□ 0.03
COPS7A-216ENST00000543170 CCDC90BQ9GZT6 254 aa15.25■□□□□ 0.03
COPS7A-216ENST00000543170 SEBOXQ9HB31 216 aaPredicted RBP15.25■□□□□ 0.03
COPS7A-216ENST00000543170 TMEM138Q9NPI0 162 aa15.25■□□□□ 0.03
COPS7A-216ENST00000543170 CKLFQ9UBR5 152 aa15.25■□□□□ 0.03
COPS7A-216ENST00000543170 OPN4Q9UHM6 478 aa15.25■□□□□ 0.03
COPS7A-216ENST00000543170 RFPL4AA6NLU0 287 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 ZNF879B4DU55 563 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 RFPL4AL1F8VTS6 287 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 KDM4BO94953 1096 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 AVPP01185 164 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 EEF1B2P24534 225 aaKnown RBP15.24■□□□□ 0.03
COPS7A-216ENST00000543170 GABRA2P47869 451 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 MLLT11Q13015 90 aaPredicted RBP15.24■□□□□ 0.03
COPS7A-216ENST00000543170 DGUOKQ16854 277 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 ZNF561Q8N587 486 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 ST8SIA4Q92187 359 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 UFD1Q92890 307 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 DERL3Q96Q80 235 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 SPACA5Q96QH8 159 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 OR14A2Q96R54 314 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 SLC25A10Q9UBX3 287 aaPredicted RBP15.24■□□□□ 0.03
COPS7A-216ENST00000543170 MAB21L2Q9Y586 359 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 AUP1Q9Y679 476 aa15.24■□□□□ 0.03
COPS7A-216ENST00000543170 FSHBP01225 129 aa15.23■□□□□ 0.03
COPS7A-216ENST00000543170 SELLP14151 372 aa15.23■□□□□ 0.03
COPS7A-216ENST00000543170 SRP14P37108 136 aaKnown RBP15.23■□□□□ 0.03
COPS7A-216ENST00000543170 SCGB2A2Q13296 93 aa15.23■□□□□ 0.03
COPS7A-216ENST00000543170 IKZF1Q13422 519 aa15.23■□□□□ 0.03
COPS7A-216ENST00000543170 TPBGQ13641 420 aa15.23■□□□□ 0.03
COPS7A-216ENST00000543170 FIP1L1Q6UN15 594 aaKnown RBP15.23■□□□□ 0.03
COPS7A-216ENST00000543170 BTN2A1Q7KYR7 527 aa15.23■□□□□ 0.03
COPS7A-216ENST00000543170 CD177Q8N6Q3 437 aa15.23■□□□□ 0.03
COPS7A-216ENST00000543170 PNLDC1Q8NA58 520 aaKnown RBP15.23■□□□□ 0.03
COPS7A-216ENST00000543170 PXT1Q8NFP0 134 aa15.23■□□□□ 0.03
COPS7A-216ENST00000543170 C8orf46Q8TAG6 207 aa15.23■□□□□ 0.03
COPS7A-216ENST00000543170 EMG1Q92979 244 aaKnown RBP15.23■□□□□ 0.03
COPS7A-216ENST00000543170 RFT1Q96AA3 541 aa15.23■□□□□ 0.03
COPS7A-216ENST00000543170 RPUSD1Q9UJJ7 312 aaKnown RBP15.23■□□□□ 0.03
COPS7A-216ENST00000543170 FOXJ3Q9UPW0 622 aa15.23■□□□□ 0.03
COPS7A-216ENST00000543170 JMJD1CQ15652 2540 aa15.23■□□□□ 0.03
COPS7A-216ENST00000543170 IGKV1-12A0A0C4DH73 117 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 F8VVB4 439 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 F8VWA3 439 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 SPRY1O43609 319 aaPredicted RBP15.22■□□□□ 0.03
COPS7A-216ENST00000543170 IGKV1D-12P01611 117 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 BCL3P20749 454 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 BDKRB2P30411 391 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 PRDX2P32119 198 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 ZNF146Q15072 292 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 KRTAP21-3Q3LHN1 58 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 SPIN3Q5JUX0 258 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 ZNF367Q7RTV3 350 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 RNF144BQ7Z419 303 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 FAM58AQ8N1B3 248 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 BATF2Q8N1L9 274 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 LY6G5BQ8NDX9 201 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 OR52N4Q8NGI2 321 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 OR5D18Q8NGL1 313 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 NANPQ8TBE9 248 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 DCTN5Q9BTE1 182 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 FAM234AQ9H0X4 552 aa15.22■□□□□ 0.03
COPS7A-216ENST00000543170 RBFOX1Q9NWB1 397 aaKnown RBP15.22■□□□□ 0.03
COPS7A-216ENST00000543170 GABRPO00591 440 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 ANGPTL7O43827 346 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 SC5DO75845 299 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 IFNA2P01563 188 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 TFF1P04155 84 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 CHRM2P08172 466 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 CPEP16870 476 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 PSMA1P25786 263 aaKnown RBP15.21■□□□□ 0.03
COPS7A-216ENST00000543170 NPBWR2P48146 333 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 BMXP51813 675 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 TRAM1Q15629 374 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 DDI2Q5TDH0 399 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 FGFRL1Q8N441 504 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 SVOPQ8N4V2 548 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 ZNRF1Q8ND25 227 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 TMEM185AQ8NFB2 350 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 UPRTQ96BW1 309 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 MGLLQ99685 303 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 HMG20AQ9NP66 347 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 ACOT13Q9NPJ3 140 aa15.21■□□□□ 0.03
COPS7A-216ENST00000543170 TRAV8-7A0A075B6U6 113 aa15.2■□□□□ 0.02
COPS7A-216ENST00000543170 TRBV23-1A0A0A0MS06 115 aa15.2■□□□□ 0.02
COPS7A-216ENST00000543170 HSMCR30P0CW71 290 aa15.2■□□□□ 0.02
COPS7A-216ENST00000543170 ZNF93P35789 620 aaPredicted RBP15.2■□□□□ 0.02
COPS7A-216ENST00000543170 TGFBR2P37173 567 aa15.2■□□□□ 0.02
COPS7A-216ENST00000543170 MAP2K4P45985 399 aa15.2■□□□□ 0.02
COPS7A-216ENST00000543170 ARMCX4Q5H9R4 360 aa15.2■□□□□ 0.02
COPS7A-216ENST00000543170 LIPKQ5VXJ0 399 aa15.2■□□□□ 0.02
COPS7A-216ENST00000543170 UNQ9370/PRO34162Q6UXP9 181 aa15.2■□□□□ 0.02
COPS7A-216ENST00000543170 CDH26Q8IXH8 852 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms