RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 MED14OSP0DP75 135 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF823P16415 610 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 TMEM11P17152 192 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 HOXB9P17482 250 aaPredicted RBP3.7□□□□□ -1.82
LIMS1-214ENST00000542845 GPX2P18283 190 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 CRABP1P29762 137 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 CDX1P47902 265 aaPredicted RBP3.7□□□□□ -1.82
LIMS1-214ENST00000542845 GPM6AP51674 278 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF134P52741 427 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 DLX6P56179 175 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 FAM3AP98173 230 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 GPR50Q13585 617 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 EIF2B1Q14232 305 aaKnown RBP3.7□□□□□ -1.82
LIMS1-214ENST00000542845 KRTAP27-1Q3LI81 207 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 CFAP161Q6P656 301 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 DNM1P34Q6PK57 102 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 TBPL2Q6SJ96 375 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 RRM2BQ7LG56 351 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 PATL1Q86TB9 770 aaKnown RBP3.7□□□□□ -1.82
LIMS1-214ENST00000542845 CATSPERDQ86XM0 798 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 CALHM1Q8IU99 346 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 IFT20Q8IY31 132 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 STPG2Q8N412 459 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF561Q8N587 486 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 COMMD1Q8N668 190 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 ASCC1Q8N9N2 400 aaKnown RBP3.7□□□□□ -1.82
LIMS1-214ENST00000542845 CYB561A3Q8NBI2 242 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 OR6Q1Q8NGQ2 317 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF671Q8TAW3 534 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 EME1Q96AY2 570 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 SGK3Q96BR1 496 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 TAMM41Q96BW9 452 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 SDSLQ96GA7 329 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 REEP6Q96HR9 211 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF714Q96N38 554 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 CLEC7AQ9BXN2 247 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 GHITMQ9H3K2 345 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 FN3KQ9H479 309 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 PNRC2Q9NPJ4 139 aaKnown RBP3.7□□□□□ -1.82
LIMS1-214ENST00000542845 RPRD1BQ9NQG5 326 aaKnown RBP3.7□□□□□ -1.82
LIMS1-214ENST00000542845 ETAA1Q9NY74 926 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 DNAJC27Q9NZQ0 273 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 NDUFAF4Q9P032 175 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 DPM3Q9P2X0 92 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF222Q9UK12 451 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 B9D1Q9UPM9 204 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 MOB4Q9Y3A3 225 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 HSPE1-MOB4S4R3N1 261 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 KMT2AQ03164 3969 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 ARRDC5A6NEK1 342 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 TVP23AA6NH52 213 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 TMEM210A6NLX4 147 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 TRPC5OSA6NMA1 111 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 NCBP2LA6PVI3 153 aaKnown RBP3.69□□□□□ -1.82
LIMS1-214ENST00000542845 LEUTXA8MZ59 168 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF732B4DXR9 585 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 C12orf77C9JDV5 145 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 F5H697 171 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 PSMD9O00233 223 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 CDC42EP2O14613 210 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 TOR1AO14656 332 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 TYROBPO43914 113 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 RENP00797 406 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 OR8U8P0C7N1 319 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 FAM106CPP0CH98 169 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 IFNA8P32881 189 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 MNDAP41218 407 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 SLC18A1P54219 525 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 SLURP1P55000 103 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 MTPNP58546 118 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 STX1BP61266 288 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 PRKCDQ05655 676 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF616Q08AN1 781 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 ST3GAL3Q11203 375 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 SF3A3Q12874 501 aaKnown RBP eCLIP3.69□□□□□ -1.82
LIMS1-214ENST00000542845 FHL1Q13642 323 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 FHL3Q13643 280 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 EDDM3AQ14507 147 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 ZIK1Q3SY52 487 aaPredicted RBP3.69□□□□□ -1.82
LIMS1-214ENST00000542845 KRT71Q3SY84 523 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 CEP78Q5JTW2 689 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 LRIF1Q5T3J3 769 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 TMEM65Q6PI78 240 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 DRAM2Q6UX65 266 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 BAIAP2L2Q6UXY1 529 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF730Q6ZMV8 503 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 FAM57BQ71RH2 274 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 GDPD3Q7L5L3 318 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 FAM122BQ7Z309 247 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 DCXRQ7Z4W1 244 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 TRAPPC6BQ86SZ2 158 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 ABHD12Q8N2K0 398 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 C17orf53Q8N3J3 647 aaPredicted RBP3.69□□□□□ -1.82
LIMS1-214ENST00000542845 TPRX1Q8N7U7 411 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 OR4P4Q8NGL7 312 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 C4orf3Q8WVX3 66 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 RASSF5Q8WWW0 418 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 OR5P3Q8WZ94 311 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 DLX4Q92988 240 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms