RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 CNOT4O95628 575 aaKnown RBP12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A15PP0C7V4 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A13PP0C7W8 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A14PP0C7W9 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 FAM90A24PP0C7X0 464 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 BCL3P20749 454 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 GPM6AP51674 278 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 CHRFAM7AQ494W8 412 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 LIN54Q6MZP7 749 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 C11orf88Q6PI97 169 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 TMEM17Q86X19 198 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 NAXEQ8NCW5 288 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 OR5A2Q8NGI9 324 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 ZNF701Q9NV72 531 aaPredicted RBP12.15□□□□□ -0.46
LDB3-207ENST00000542786 DKK4Q9UBT3 224 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 SHPKQ9UHJ6 478 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 CUL9Q8IWT3 2517 aa12.15□□□□□ -0.46
LDB3-207ENST00000542786 ZNF732B4DXR9 585 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 SFT2D2O95562 160 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 RPA2P15927 270 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 EXOSC2Q13868 293 aaKnown RBP12.14□□□□□ -0.47
LDB3-207ENST00000542786 ZNF169Q14929 603 aaPredicted RBP12.14□□□□□ -0.47
LDB3-207ENST00000542786 TMEM65Q6PI78 240 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 FBXW12Q6X9E4 464 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 CCDC36Q8IYA8 594 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 OR5M9Q8NGP3 310 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 SARAFQ96BY9 339 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 PHB2Q99623 299 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 CMSS1Q9BQ75 279 aaKnown RBP12.14□□□□□ -0.47
LDB3-207ENST00000542786 PCDHB16Q9NRJ7 776 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 MTCH1Q9NZJ7 389 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 RCC2Q9P258 522 aaKnown RBP12.14□□□□□ -0.47
LDB3-207ENST00000542786 L7N2F9 121 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 M0R233 179 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 PDGFAP04085 211 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 PI3P19957 117 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 FUT3P21217 361 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 VAMP1P23763 118 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 FGF12P61328 243 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 BAMBIQ13145 260 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 VWA1Q6PCB0 445 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 BRICD5Q6PL45 260 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 CASTOR1Q8WTX7 329 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 SLAMF9Q96A28 289 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 MARS2Q96GW9 593 aaKnown RBP12.14□□□□□ -0.47
LDB3-207ENST00000542786 SCGB3A2Q96PL1 93 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 CEP250Q9BV73 2442 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 TMEM165Q9HC07 324 aa12.14□□□□□ -0.47
LDB3-207ENST00000542786 FXYD6-FXYD2A0A087WZ82 144 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 ANKRD34BA5PLL1 514 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 ARPC5O15511 151 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 SMPD2O60906 423 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 LYZL6O75951 148 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 SLC25A4P12235 298 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 GLRA1P23415 457 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 OPRM1P35372 400 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 HAAOP46952 286 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 ANKRD55Q3KP44 614 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 DHRS11Q6UWP2 260 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 CLEC18BQ6UXF7 455 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 Q6ZS92 163 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 SEM1Q6ZVN7 128 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 TMUB2Q71RG4 321 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 ASCL5Q7RTU5 278 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 ZADH2Q8N4Q0 377 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 WDR31Q8NA23 367 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 OR6K3Q8NGY3 331 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 FXYD6Q9H0Q3 95 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 MPC1Q9Y5U8 109 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 AUP1Q9Y679 476 aa12.13□□□□□ -0.47
LDB3-207ENST00000542786 OR5B21A6NL26 309 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 PROB1E7EW31 1015 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 SYNGR1O43759 233 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 CGAP01215 116 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 HOXB1P14653 301 aaPredicted RBP12.12□□□□□ -0.47
LDB3-207ENST00000542786 PTGER4P35408 488 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 TGFBR3Q03167 851 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 FOXF2Q12947 444 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 PDCD1Q15116 288 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 TBC1D28Q2M2D7 210 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 INO80CQ6PI98 192 aaPredicted RBP12.12□□□□□ -0.47
LDB3-207ENST00000542786 C1orf162Q8NEQ5 155 aaPredicted RBP12.12□□□□□ -0.47
LDB3-207ENST00000542786 OR5L1Q8NGL2 311 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 IL36RNQ9UBH0 155 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 URB1O60287 2271 aaKnown RBP12.12□□□□□ -0.47
LDB3-207ENST00000542786 A0A1W2PR80 420 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 LINC00862A6NCI5 91 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 AHRRA9YTQ3 701 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 PRSS44E7EML9 344 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 TNFSF13O75888 250 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 OR5H8P0DN80 308 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 C4BPBP20851 252 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 S100A11P31949 105 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 TMEM211Q6ICI0 200 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 OR2T2Q6IF00 324 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 Q6ZS49 121 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 BATF2Q8N1L9 274 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 BHLHE23Q8NDY6 225 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 C12orf4Q9NQ89 552 aa12.12□□□□□ -0.47
LDB3-207ENST00000542786 LHX6Q9UPM6 363 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms