RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 PECRQ9BY49 303 aa11.23□□□□□ -0.61
CHFR-221ENST00000542714 C11orf54Q9H0W9 315 aaPredicted RBP11.23□□□□□ -0.61
CHFR-221ENST00000542714 PLK3Q9H4B4 646 aa11.23□□□□□ -0.61
CHFR-221ENST00000542714 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHFR-221ENST00000542714 PCDHB16Q9NRJ7 776 aa11.23□□□□□ -0.61
CHFR-221ENST00000542714 NKIRAS2Q9NYR9 191 aa11.23□□□□□ -0.61
CHFR-221ENST00000542714 KLK11Q9UBX7 282 aa11.23□□□□□ -0.61
CHFR-221ENST00000542714 TANC2Q9HCD6 1990 aa11.23□□□□□ -0.61
CHFR-221ENST00000542714 ICE1Q9Y2F5 2266 aa11.23□□□□□ -0.61
CHFR-221ENST00000542714 PLSCR5A0PG75 271 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 MEIS3P1A6NDR6 274 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 H7C417 338 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 SULT1C2O00338 296 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 NOS1APO75052 506 aaPredicted RBP11.22□□□□□ -0.61
CHFR-221ENST00000542714 ACAA1P09110 424 aaPredicted RBP11.22□□□□□ -0.61
CHFR-221ENST00000542714 GSTP1P09211 210 aaKnown RBP11.22□□□□□ -0.61
CHFR-221ENST00000542714 CHATP28329 748 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 RBMXP38159 391 aaKnown RBP11.22□□□□□ -0.61
CHFR-221ENST00000542714 KIR2DL3P43628 341 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 RFX2P48378 723 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 SNU13P55769 128 aaKnown RBP11.22□□□□□ -0.61
CHFR-221ENST00000542714 HOXA4Q00056 320 aaPredicted RBP11.22□□□□□ -0.61
CHFR-221ENST00000542714 OXA1LQ15070 435 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 PDCD1Q15116 288 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 MST1LQ2TV78 715 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 ZNF672Q499Z4 452 aaPredicted RBP11.22□□□□□ -0.61
CHFR-221ENST00000542714 ARFGEF3Q5TH69 2177 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 HACD4Q5VWC8 232 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 ZNF57Q68EA5 555 aaPredicted RBP11.22□□□□□ -0.61
CHFR-221ENST00000542714 DCDC5Q6ZRR9 648 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 RAI1Q7Z5J4 1906 aaPredicted RBP11.22□□□□□ -0.61
CHFR-221ENST00000542714 CENPSQ8N2Z9 138 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 POC1AQ8NBT0 407 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 C19orf18Q8NEA5 215 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 NUDCD2Q8WVJ2 157 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 ITLN1Q8WWA0 313 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 ST8SIA4Q92187 359 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 SCPEP1Q9HB40 452 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 HES4Q9HCC6 221 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 UFSP2Q9NUQ7 469 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 MTFP1Q9UDX5 166 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 ST3GAL6Q9Y274 331 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 POLDIP2Q9Y2S7 368 aa11.22□□□□□ -0.61
CHFR-221ENST00000542714 CACNA1DQ01668 2161 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 A0A1B0GVG6 124 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A10PA6NDY2 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A18PA6NE21 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A16PA6NEW6 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A20PA6NIJ5 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A8PA6NJQ4 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A7PA6NKC0 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A22PA8MWA6 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A12PA8MX19 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A5PA8MXJ8 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A23PA8MXZ1 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 LPLP06858 475 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 ADH4P08319 380 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A15PP0C7V4 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A13PP0C7W8 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A14PP0C7W9 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM90A24PP0C7X0 464 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 PRKACAP17612 351 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 SERPINF1P36955 418 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 PMELP40967 661 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 DEFA1P59665 94 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 DEFA3P59666 94 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 SRSF1Q07955 248 aaKnown RBP eCLIP11.21□□□□□ -0.614e-6■□□□□ 8.1
CHFR-221ENST00000542714 MZT1Q08AG7 82 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 EFNB3Q15768 340 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 PNLIPRP3Q17RR3 467 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 GDPD3Q7L5L3 318 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 C6orf201Q7Z4U5 140 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 FAM58AQ8N1B3 248 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 CELF2-AS1Q8N7Q2 184 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 EMG1Q92979 244 aaKnown RBP11.21□□□□□ -0.61
CHFR-221ENST00000542714 POM121Q96HA1 1249 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 DHRS9Q9BPW9 319 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 RHOFQ9HBH0 211 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 C1orf123Q9NWV4 160 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 RALYQ9UKM9 306 aaKnown RBP11.21□□□□□ -0.61
CHFR-221ENST00000542714 ANAPC10Q9UM13 185 aa11.21□□□□□ -0.61
CHFR-221ENST00000542714 ANKHD1Q8IWZ3 2542 aaKnown RBP11.21□□□□□ -0.61
CHFR-221ENST00000542714 DYSFO75923 2080 aa11.21□□□□□ -0.62
CHFR-221ENST00000542714 ANKRD20A5PA0PJZ0 165 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 A6NLC8 198 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 WNT9BO14905 357 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 PTTG1O95997 202 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 CD55P08174 381 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 EGR1P18146 543 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 APOBEC3AP31941 199 aaPredicted RBP11.2□□□□□ -0.62
CHFR-221ENST00000542714 BTCP35070 178 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 GATA4P43694 442 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 INPP1P49441 399 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 IL13RA2Q14627 380 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 NKAPLQ5M9Q1 402 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 Q6ZNX1 250 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 TRAPPC6BQ86SZ2 158 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 TOMM5Q8N4H5 51 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 FAM222BQ8WU58 562 aa11.2□□□□□ -0.62
CHFR-221ENST00000542714 SULT4A1Q9BR01 284 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms