RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 DNAJB9Q9UBS3 223 aa14.17□□□□□ -0.14
CLSTN3-214ENST00000542663 COPS3Q9UNS2 423 aa14.17□□□□□ -0.14
CLSTN3-214ENST00000542663 LINC00312Q9Y6C7 94 aa14.17□□□□□ -0.14
CLSTN3-214ENST00000542663 V9GYS6 101 aa14.17□□□□□ -0.14
CLSTN3-214ENST00000542663 RYR2Q92736 4967 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 HTR1DP28221 377 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 RPS7P62081 194 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 EDDM3AQ14507 147 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 SPATS1Q496A3 300 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 BAIAP2L2Q6UXY1 529 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 RNF144BQ7Z419 303 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 ZNF679Q8IYX0 411 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 OR52N4Q8NGI2 321 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 OR14K1Q8NGZ2 314 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 BCAS4Q8TDM0 211 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 DPF1Q92782 380 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 AKR1E2Q96JD6 320 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 SNX22Q96L94 193 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 RBM14Q96PK6 669 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 GPR61Q9BZJ8 451 aa14.16□□□□□ -0.14
CLSTN3-214ENST00000542663 A0A1B0GTI1 187 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 hADV38S2A0JD32 116 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 H3BUI4 141 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 ZNF254O75437 659 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 DNAJC8O75937 253 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 OR2F2O95006 317 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 IGHA1P01876 353 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 MRPL3P09001 348 aaKnown RBP14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 THBS3P49746 956 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 ESRRGP62508 458 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 CDK5Q00535 292 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 IL18R1Q13478 541 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 APOFQ13790 326 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 ZNF829Q3KNS6 432 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 Q6ZSR3 168 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 TRMT10AQ8TBZ6 339 aaKnown RBP14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 GIPC3Q8TF64 312 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 CHID1Q9BWS9 393 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 ARL8BQ9NVJ2 186 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 HHLA2Q9UM44 414 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 U3KQK5 164 aa14.15□□□□□ -0.14
CLSTN3-214ENST00000542663 HUWE1Q7Z6Z7 4374 aaKnown RBP14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 IGKV1-27A0A075B6S5 117 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 ARRDC5A6NEK1 342 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 CCDC182A6NF36 153 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 RIDAP52758 137 aaKnown RBP14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 ZBTB49Q6ZSB9 765 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 C18orf65Q6ZTR6 163 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 TMEM179BQ7Z7N9 219 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 OSR2Q8N2R0 312 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 CEP19Q96LK0 163 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 ZNF649Q9BS31 505 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 CADM1Q9BY67 442 aaKnown RBP14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 CHST6Q9GZX3 395 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 ZNF446Q9NWS9 450 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 DPM3Q9P2X0 92 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 IL36RNQ9UBH0 155 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 SACSQ9NZJ4 4579 aa14.14□□□□□ -0.15
CLSTN3-214ENST00000542663 STAB2Q8WWQ8 2551 aa14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 PSPNO60542 156 aa14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 IGLV1-47P01700 117 aa14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 HMGN1P05114 100 aa14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 BRS3P32247 399 aa14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 DCTN2Q13561 401 aaKnown RBP14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 NKAPLQ5M9Q1 402 aa14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 C16orf89Q6UX73 402 aa14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 ELMOD2Q8IZ81 293 aa14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 STMN2Q93045 179 aa14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 SLAMF9Q96A28 289 aa14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 TAGLN3Q9UI15 199 aa14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 GTF2A1LQ9UNN4 478 aa14.13□□□□□ -0.15
CLSTN3-214ENST00000542663 FAM230AA0A1W2PPH8 454 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 DHRS7CA6NNS2 312 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 LOC110117498-PIK3R3F6TDL0 507 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 H0YHG0 523 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 MAGEB4O15481 346 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 INMTO95050 263 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 NHLRC4P0CG21 123 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 RPL23AP62750 156 aaKnown RBP14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 BDH1Q02338 343 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 GRK1Q15835 563 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 C9orf152Q5JTZ5 239 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 TMEM236Q5W0B7 351 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 PLEKHG7Q6ZR37 379 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 PIGWQ7Z7B1 504 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 ZNF329Q86UD4 541 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 ABHD12Q8N2K0 398 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 OR51D1Q8NGF3 324 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 CAPSLQ8WWF8 208 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 ASB17Q8WXJ9 295 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 MCRIP2Q9BUT9 160 aaKnown RBP14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 IKZF2Q9UKS7 526 aa14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.12□□□□□ -0.15
CLSTN3-214ENST00000542663 PSMB11A5LHX3 300 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 FAM172BPA6NC97 362 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 SNX3O60493 162 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 E2F6O75461 281 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 HAND1O96004 215 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 OSMP13725 252 aa14.11□□□□□ -0.15
CLSTN3-214ENST00000542663 PEX2P28328 305 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 1145.8 ms