RNA–Protein interactions for RNA: ENST00000542629.5

PPFIBP1-215, Transcript of PPFIA binding protein 1, human

TSL 1 (best) BASIC

Gene PPFIBP1, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIBP1-215	ENST00000542629	CRIM1	Q9NZV1	1036 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	PRSS50	Q9UI38	385 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	ANXA10	Q9UJ72	324 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	SP1	P08047	785 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	IL32	P24001	234 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	MPZ	P25189	248 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	NUP62	P37198	522 aa	Predicted RBP	11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	ALDH3B1	P43353	468 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	PDZK1IP1	Q13113	114 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	PLA2G2C	Q5R387	149 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	KCNRG	Q8N5I3	272 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	SLAMF9	Q96A28	289 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	C10orf35	Q96D05	121 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	CPNE2	Q96FN4	548 aa	Predicted RBP	11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	OSGIN2	Q9Y236	505 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	CACNA1D	Q01668	2161 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	OR2F2	O95006	317 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	OR2F1	Q13607	317 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	RAB32	Q13637	225 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	SLC10A1	Q14973	349 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	TRIP6	Q15654	476 aa	Known RBP	11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	TUSC1	Q2TAM9	212 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	RGS7BP	Q6MZT1	257 aa	Predicted RBP	11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	GCNT2	Q8N0V5	402 aa		11.65	□□□□□ -0.54
PPFIBP1-215	ENST00000542629	SPAAR	A0A1B0GVQ0	90 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	BCL2L11	O43521	198 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	ZNF708	P17019	499 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	PTGER4	P35408	488 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	FUT6	P51993	359 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	ARL6IP1	Q15041	203 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	ABCA11P	Q4W5N1	156 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	FER1L6-AS2	Q96M78	137 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	OR5AC2	Q9NZP5	309 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	MSGN1	A6NI15	193 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629		H0YIZ8	118 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	KLRC4-KLRK1	H3BQV0	150 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	CCL11	P51671	97 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	UBA52	P62987	128 aa	Known RBP	11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	MALL	Q13021	153 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	DEFB124	Q8NES8	71 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	OR1S1	Q8NH92	325 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	MARS2	Q96GW9	593 aa	Known RBP	11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	BCO1	Q9HAY6	547 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	IL36RN	Q9UBH0	155 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	STARD10	Q9Y365	291 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	XRCC2	O43543	280 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	CD46	P15529	392 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	FCGR2C	P31995	323 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	AKR1C2	P52895	323 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	AKR1C1	Q04828	323 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	PLP2	Q04941	152 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	IAH1	Q2TAA2	248 aa	Predicted RBP	11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	LHFPL1	Q86WI0	220 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	SGPP2	Q8IWX5	399 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	SPERT	Q8NA61	448 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	RRNAD1	Q96FB5	475 aa	Known RBP	11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	LIME1	Q9H400	295 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	TAS2R3	Q9NYW6	316 aa		11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.64	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	MSTN	O14793	375 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	FCGR3A	P08637	254 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	CHAT	P28329	748 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	PIGP	P57054	158 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	PRDX4	Q13162	271 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	EIF3I	Q13347	325 aa	Known RBP	11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	TMEM185A	Q8NFB2	350 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	PXT1	Q8NFP0	134 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	OR5L1	Q8NGL2	311 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	ADAMTS17	Q8TE56	1095 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	C12orf4	Q9NQ89	552 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	SNAPC5	O75971	98 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	APOC3	P02656	99 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	ASB13	Q8WXK3	278 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	ZNF488	Q96MN9	340 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	HS3ST6	Q96QI5	342 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	ANAPC10	Q9UM13	185 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	LSM5	Q9Y4Y9	91 aa	Known RBP	11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	AUP1	Q9Y679	476 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	KIAA2026	Q5HYC2	2103 aa		11.63	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	MGA	Q8IWI9	3026 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629		F8VVB4	439 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629		F8VWA3	439 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	NKX2-8	O15522	239 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	IFNA2	P01563	188 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	SLC25A4	P12235	298 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	BCL3	P20749	454 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	RNFT1	Q5M7Z0	435 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	ZNF585A	Q6P3V2	769 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	TMED6	Q8WW62	240 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	ARPC5L	Q9BPX5	153 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	SMIM3	Q9BZL3	60 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	RGCC	Q9H4X1	137 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	ASF1B	Q9NVP2	202 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	KCNMB2	Q9Y691	235 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	DBX1	A6NMT0	343 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	ZNF732	B4DXR9	585 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	BET1	O15155	118 aa		11.62	□□□□□ -0.55
PPFIBP1-215	ENST00000542629	CYCS	P99999	105 aa	Known RBP	11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms