RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 WBP2NLQ6ICG8 309 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF585AQ6P3V2 769 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 IL34Q6ZMJ4 242 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 SLC35D2Q76EJ3 337 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 LYG2Q86SG7 212 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 OR4K17Q8NGC6 315 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 OR13D1Q8NGV5 346 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 ASB5Q8WWX0 329 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 FOXN4Q96NZ1 517 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 FAM110AQ9BQ89 295 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 FAAP24Q9BTP7 215 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 RGCCQ9H4X1 137 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 MTCH1Q9NZJ7 389 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 UPB1Q9UBR1 384 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 COPS7AQ9UBW8 275 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 SDK1Q7Z5N4 2213 aa7.04□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF354AO60765 605 aaPredicted RBP7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 ALOX12BO75342 701 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 TXNDC12O95881 172 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 CD8AP01732 235 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 CD74P04233 296 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 IL6RP08887 468 aaPredicted RBP7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 SP9P0CG40 484 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 UCP1P25874 307 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 CAV2P51636 162 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 EFNB2P52799 333 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 BSXQ3C1V8 233 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 AKR1C8PQ5T2L2 129 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 MRPL14Q6P1L8 145 aaKnown RBP7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 SLC5A7Q9GZV3 580 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 AKIRIN1Q9H9L7 192 aaPredicted RBP7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 TAS2R8Q9NYW2 309 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 STEAP1Q9UHE8 339 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 CSAG2Q9Y5P2 127 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 HEATR5AQ86XA9 2040 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 LOC105371242A0A075B767 164 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 SEC14L6B5MCN3 397 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 SLC25A4P12235 298 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 SELEP16581 610 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF28P17035 718 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 BRS3P32247 399 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 PRSS3P35030 304 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 PLCXD2Q0VAA5 305 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 MST1LQ2TV78 715 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 GPR157Q5UAW9 335 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 TMEM244Q5VVB8 128 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 NSUN5P2Q63ZY6 315 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 TMEM205Q6UW68 189 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 MARCH3Q86UD3 253 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 DND1Q8IYX4 353 aaKnown RBP7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 OR51D1Q8NGF3 324 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 OR6K6Q8NGW6 343 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 OR4K13Q8NH42 304 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 RNF138Q8WVD3 245 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 NUDCD2Q8WVJ2 157 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 GLMPQ8WWB7 406 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 CBLN4Q9NTU7 201 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 HAO2Q9NYQ3 351 aa7.03□□□□□ -1.28
PDLIM5-221ENST00000542407 OTX1P32242 354 aaPredicted RBP7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 HSF1Q00613 529 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 TMEM249Q2WGJ8 235 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 PHF19Q5T6S3 580 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 RPL22L1Q6P5R6 122 aaKnown RBP7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 STAC2Q6ZMT1 411 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF627Q7L945 461 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 CD163Q86VB7 1156 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 GABRG1Q8N1C3 465 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 LRRC75AQ8NAA5 344 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 OR52E2Q8NGJ4 325 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 C15orf40Q8WUR7 153 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 KIRREL1Q96J84 757 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 GPX7Q96SL4 187 aaPredicted RBP7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 ATG5Q9H1Y0 275 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF701Q9NV72 531 aaPredicted RBP7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 LPAR3Q9UBY5 353 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 CACFD1Q9UGQ2 172 aa7.02□□□□□ -1.28
PDLIM5-221ENST00000542407 F6UZH7 168 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 DCTN6O00399 190 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 XRCC3O43542 346 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 LRP3O75074 770 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 MT-ATP6P00846 226 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 PNMTP11086 282 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 TNFSF4P23510 183 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 SLC6A6P31641 620 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 IL2RGP31785 369 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 HGFACQ04756 655 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 IL11RAQ14626 422 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 ZNF74Q16587 644 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 LPAL2Q16609 132 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 OCIAD2Q56VL3 154 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 RNFT1Q5M7Z0 435 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 HLA-DQA1Q5Y7H0 255 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 PET117Q6UWS5 81 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 C16orf47Q6ZP98 133 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 GALNT16Q8N428 558 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 OR2M7Q8NG81 312 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 OR10AD1Q8NGE0 317 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 KCNE4Q8WWG9 221 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 ASB13Q8WXK3 278 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 FAM46BQ96A09 425 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 248 ms