RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 USP43Q70EL4 1123 aa11.4□□□□□ -0.58
TNFSF13B-206ENST00000542136 KIR3DL3Q8N743 410 aa11.4□□□□□ -0.58
TNFSF13B-206ENST00000542136 FAM216BQ8N7L0 139 aa11.4□□□□□ -0.58
TNFSF13B-206ENST00000542136 DCTN5Q9BTE1 182 aa11.4□□□□□ -0.58
TNFSF13B-206ENST00000542136 TMEM138Q9NPI0 162 aa11.4□□□□□ -0.58
TNFSF13B-206ENST00000542136 SNTG1Q9NSN8 517 aa11.4□□□□□ -0.58
TNFSF13B-206ENST00000542136 SLC25A10Q9UBX3 287 aaPredicted RBP11.4□□□□□ -0.58
TNFSF13B-206ENST00000542136 MAB21L2Q9Y586 359 aa11.4□□□□□ -0.58
TNFSF13B-206ENST00000542136 KPTNQ9Y664 436 aa11.4□□□□□ -0.58
TNFSF13B-206ENST00000542136 ARHGAP32A7KAX9 2087 aa11.4□□□□□ -0.58
TNFSF13B-206ENST00000542136 WNK2Q9Y3S1 2297 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 TRBV5-7A0A0A0MS05 114 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 TRBV23-1A0A0A0MS06 115 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 KDM4BO94953 1096 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 CHRM2P08172 466 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 IGFBP3P17936 291 aaPredicted RBP11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 FSTP19883 344 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 FPR2P25090 351 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 MAPK3P27361 379 aaPredicted RBP11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 GABRA2P47869 451 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 GMFBP60983 142 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 DGUOKQ16854 277 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 ELP2Q6IA86 826 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 CRIP3Q6Q6R5 217 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 ASCL4Q6XD76 172 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 FAM58AQ8N1B3 248 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 CD177Q8N6Q3 437 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 Q8NFD4 153 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 PXT1Q8NFP0 134 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 OR5D13Q8NGL4 314 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 ST8SIA4Q92187 359 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 CNBD2Q96M20 576 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 ZNF488Q96MN9 340 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 HMG20AQ9NP66 347 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 CKLFQ9UBR5 152 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 NUP50Q9UKX7 468 aa11.39□□□□□ -0.59
TNFSF13B-206ENST00000542136 JMJD1CQ15652 2540 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 K7N7A8 449 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 HCKP08631 526 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 SOX2P48431 317 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 ZP1P60852 638 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 PPP3R1P63098 170 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 TPBGQ13641 420 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 PDCD1Q15116 288 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 ARMCX4Q5H9R4 360 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 ASPHD2Q6ICH7 369 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 METAP1DQ6UB28 335 aaPredicted RBP11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 UNQ9370/PRO34162Q6UXP9 181 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 C9orf139Q6ZV77 190 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 CMTM4Q8IZR5 234 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 ZNRF1Q8ND25 227 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 SLAMF9Q96A28 289 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 WDFY2Q96P53 400 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 SIRPDQ9H106 197 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 UNKLQ9H9P5 680 aaKnown RBP11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 GLS2Q9UI32 602 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 FOXJ3Q9UPW0 622 aa11.38□□□□□ -0.59
TNFSF13B-206ENST00000542136 ZFHX3Q15911 3703 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 F8VVB4 439 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 F8VWA3 439 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 TOX4O94842 621 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 PLATP00750 562 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 TMEM225BP0DP42 221 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 MMP9P14780 707 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 EPHA1P21709 976 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 LMO1P25800 156 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 TGFBR2P37173 567 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 GABARAPL2P60520 117 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 IKZF1Q13422 519 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 DOC2BQ14184 412 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 TRAM1Q15629 374 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 KLF17Q5JT82 389 aaPredicted RBP11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 METTL11BQ5VVY1 283 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 PHYHIPQ92561 330 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 OR5M11Q96RB7 305 aa11.37□□□□□ -0.59
TNFSF13B-206ENST00000542136 IGKV1-12A0A0C4DH73 117 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 A0A1B0GW55 424 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 A0A1W2PPH5 198 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 MEGF11A6BM72 1044 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 M0R1W7 72 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 SH2D1BO14796 132 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 SPRY1O43609 319 aaPredicted RBP11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 RRP9O43818 475 aaKnown RBP11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 ZNF737O75373 536 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 SC5DO75845 299 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 IGKV1D-12P01611 117 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 TK1P04183 234 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 DUX4L2P0CJ85 424 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 DUX4L3P0CJ86 424 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 DUX4L4P0CJ87 422 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 DUX4L5P0CJ88 424 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 DUX4L6P0CJ89 424 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 DUX4L7P0CJ90 424 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 NDUFB7P17568 137 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 PSMA1P25786 263 aaKnown RBP11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 BDKRB2P30411 391 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 PTGFRP43088 359 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 NPBWR2P48146 333 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 MTNR1BP49286 362 aa11.36□□□□□ -0.59
TNFSF13B-206ENST00000542136 POU3F4P49335 361 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms