RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PLAC9Q5JTB6 97 aa23.58■■□□□ 1.37
CCM2-218ENST00000541586 Q6ZR03 302 aa23.58■■□□□ 1.37
CCM2-218ENST00000541586 WDR86Q86TI4 376 aa23.58■■□□□ 1.37
CCM2-218ENST00000541586 GPX8Q8TED1 209 aa23.58■■□□□ 1.37
CCM2-218ENST00000541586 RAB3CQ96E17 227 aa23.58■■□□□ 1.37
CCM2-218ENST00000541586 SEH1LQ96EE3 360 aa23.58■■□□□ 1.37
CCM2-218ENST00000541586 SYT3Q9BQG1 590 aa23.58■■□□□ 1.37
CCM2-218ENST00000541586 PCDHB16Q9NRJ7 776 aa23.58■■□□□ 1.37
CCM2-218ENST00000541586 FOXI3A8MTJ6 420 aaPredicted RBP23.57■■□□□ 1.36
CCM2-218ENST00000541586 H7C417 338 aa23.57■■□□□ 1.36
CCM2-218ENST00000541586 SYNGR1O43759 233 aa23.57■■□□□ 1.36
CCM2-218ENST00000541586 KRTAP10-9P60411 292 aa23.57■■□□□ 1.36
CCM2-218ENST00000541586 KLF9Q13886 244 aaPredicted RBP23.57■■□□□ 1.36
CCM2-218ENST00000541586 MKXQ8IYA7 352 aa23.57■■□□□ 1.36
CCM2-218ENST00000541586 OSR2Q8N2R0 312 aa23.57■■□□□ 1.36
CCM2-218ENST00000541586 OR10AD1Q8NGE0 317 aa23.57■■□□□ 1.36
CCM2-218ENST00000541586 ZNF442Q9H7R0 627 aa23.57■■□□□ 1.36
CCM2-218ENST00000541586 MTCH1Q9NZJ7 389 aa23.57■■□□□ 1.36
CCM2-218ENST00000541586 MTFP1Q9UDX5 166 aa23.57■■□□□ 1.36
CCM2-218ENST00000541586 SULT1C2O00338 296 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 IGHV3-13P01766 116 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 SERPINF1P36955 418 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 FBXL14Q8N1E6 418 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 BATF2Q8N1L9 274 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 MUC15Q8N387 334 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 MRPS24Q96EL2 167 aaKnown RBP23.56■■□□□ 1.36
CCM2-218ENST00000541586 SCPEP1Q9HB40 452 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 MSL2Q9HCI7 577 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 hCG_2014768A0A024R1R8 64 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 LRP5LA4QPB2 252 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 RBBP9O75884 186 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 CYB5AP00167 134 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 LPLP06858 475 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 MELTFP08582 738 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 HIST1H1DP16402 221 aaKnown RBP23.56■■□□□ 1.36
CCM2-218ENST00000541586 BCL3P20749 454 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 GABRR1P24046 479 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 BLVRBP30043 206 aaPredicted RBP23.56■■□□□ 1.36
CCM2-218ENST00000541586 KLF3P57682 345 aaPredicted RBP23.56■■□□□ 1.36
CCM2-218ENST00000541586 MZT2BQ6NZ67 158 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 CCBE1Q6UXH8 406 aaPredicted RBP23.56■■□□□ 1.36
CCM2-218ENST00000541586 Q8NFD4 153 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 NRGNQ92686 78 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 ARHGAP5-AS1Q96IT6 56 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 NEDD4LQ96PU5 975 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 MRPL37Q9BZE1 423 aaKnown RBP23.56■■□□□ 1.36
CCM2-218ENST00000541586 PKIBQ9C010 78 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 PLK3Q9H4B4 646 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 RBFOX1Q9NWB1 397 aaKnown RBP23.56■■□□□ 1.36
CCM2-218ENST00000541586 KCNK7Q9Y2U2 307 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 CACNG2Q9Y698 323 aa23.56■■□□□ 1.36
CCM2-218ENST00000541586 AKAP6Q13023 2319 aa23.55■■□□□ 1.36
CCM2-218ENST00000541586 A0A1B0GWJ7 208 aa23.55■■□□□ 1.36
CCM2-218ENST00000541586 MEIS3P1A6NDR6 274 aa23.55■■□□□ 1.36
CCM2-218ENST00000541586 MPZP25189 248 aa23.55■■□□□ 1.36
CCM2-218ENST00000541586 IL24Q13007 206 aa23.55■■□□□ 1.36
CCM2-218ENST00000541586 PIGYQ3MUY2 71 aa23.55■■□□□ 1.36
CCM2-218ENST00000541586 OR13G1Q8NGZ3 307 aa23.55■■□□□ 1.36
CCM2-218ENST00000541586 MRPL24Q96A35 216 aaKnown RBP23.55■■□□□ 1.36
CCM2-218ENST00000541586 LIME1Q9H400 295 aa23.55■■□□□ 1.36
CCM2-218ENST00000541586 LAMP3Q9UQV4 416 aa23.55■■□□□ 1.36
CCM2-218ENST00000541586 IGLV3-9A0A075B6K5 115 aa23.54■■□□□ 1.36
CCM2-218ENST00000541586 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP23.54■■□□□ 1.36
CCM2-218ENST00000541586 ECDO95905 644 aaPredicted RBP23.54■■□□□ 1.36
CCM2-218ENST00000541586 SELENOVP59797 346 aa23.54■■□□□ 1.36
CCM2-218ENST00000541586 TAF9Q16594 264 aa23.54■■□□□ 1.36
CCM2-218ENST00000541586 CYYR1Q96J86 154 aa23.54■■□□□ 1.36
CCM2-218ENST00000541586 FAIMQ9NVQ4 179 aa23.54■■□□□ 1.36
CCM2-218ENST00000541586 ANKRD20A5PA0PJZ0 165 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 F8VVB4 439 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 F8VWA3 439 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 TRAPPC2LH3BP13 241 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 J3QT63 122 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 MFNGO00587 321 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 GSTP1P09211 210 aaKnown RBP23.53■■□□□ 1.36
CCM2-218ENST00000541586 GSTT2BP0CG30 244 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 DYRK1AQ13627 763 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 OLFML2AQ68BL7 652 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 ELP2Q6IA86 826 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 NKIRAS2Q9NYR9 191 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 ST3GAL6Q9Y274 331 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 FBN2P35556 2912 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 TMEM210A6NLX4 147 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 F5H5P2 479 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 AKR7A2O43488 359 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 SOD3P08294 240 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 RBM11P57052 281 aaKnown RBP23.53■■□□□ 1.36
CCM2-218ENST00000541586 AP3S2P59780 193 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 ZNF154Q13106 437 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 SCCPDHQ8NBX0 429 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 CXXC4Q9H2H0 198 aa23.53■■□□□ 1.36
CCM2-218ENST00000541586 GEMIN2O14893 280 aaKnown RBP23.52■■□□□ 1.36
CCM2-218ENST00000541586 RHBDL1O75783 438 aa23.52■■□□□ 1.36
CCM2-218ENST00000541586 PCGF3Q3KNV8 242 aa23.52■■□□□ 1.36
CCM2-218ENST00000541586 SIGIRRQ6IA17 410 aa23.52■■□□□ 1.36
CCM2-218ENST00000541586 SPERTQ8NA61 448 aa23.52■■□□□ 1.36
CCM2-218ENST00000541586 ENKURQ8TC29 256 aa23.52■■□□□ 1.36
CCM2-218ENST00000541586 NUDCD2Q8WVJ2 157 aa23.52■■□□□ 1.36
CCM2-218ENST00000541586 PECRQ9BY49 303 aa23.52■■□□□ 1.36
CCM2-218ENST00000541586 ZNF581Q9P0T4 197 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms