RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 PP6455Q8WZ26 134 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 SGK3Q96BR1 496 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 FGGYQ96C11 551 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 GNPNAT1Q96EK6 184 aaPredicted RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 BTF3L4Q96K17 158 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 SLC25A31Q9H0C2 315 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 MRPL22Q9NWU5 206 aaKnown RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 GAR1Q9NY12 217 aaKnown RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 CGGBP1Q9UFW8 167 aaPredicted RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 RPH3AQ9Y2J0 694 aaPredicted RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 UNC79Q9P2D8 2635 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 TRAV20A0A0B4J274 112 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 DUXBA0A1W2PPF3 345 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 FAM230AA0A1W2PPH8 454 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 ANKUB1A6NFN9 424 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 C9J4A7 227 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 TSTD3H0UI37 97 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 PMP2P02689 132 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 HOXB5P09067 269 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 HOXA5P20719 270 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 OR1D4P47884 311 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 PPT1P50897 306 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 AKR1C2P52895 323 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 S100A10P60903 97 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 CSNK2A1P68400 391 aaPredicted RBP9.11□□□□□ -0.95
CHFR-219ENST00000541341 AKR1C1Q04828 323 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 RAB32Q13637 225 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 ODF4Q2M2E3 257 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 IAH1Q2TAA2 248 aaPredicted RBP9.11□□□□□ -0.95
CHFR-219ENST00000541341 SHISA6Q6ZSJ9 500 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 SLC35D2Q76EJ3 337 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 METTL27Q8N6F8 245 aaPredicted RBP9.11□□□□□ -0.95
CHFR-219ENST00000541341 SUMF2Q8NBJ7 301 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 ADAD2Q8NCV1 583 aaKnown RBP9.11□□□□□ -0.95
CHFR-219ENST00000541341 CSNK2A3Q8NEV1 391 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 OR10G4Q8NGN3 311 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 ST7LQ8TDW4 575 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.11□□□□□ -0.95
CHFR-219ENST00000541341 MAFIPQ8WZ33 124 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 GALNT14Q96FL9 552 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 AKR1E2Q96JD6 320 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 SPSB2Q99619 263 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 PBOV1Q9GZY1 135 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 C5orf66Q9H5L9 145 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 SDHAF3Q9NRP4 125 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 SERINC1Q9NRX5 453 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 LANCL2Q9NS86 450 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 DECR2Q9NUI1 292 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 TMEM242Q9NWH2 141 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 TINAGQ9UJW2 476 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 RNF150Q9ULK6 438 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 OSGIN2Q9Y236 505 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 FAM96BQ9Y3D0 163 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 CPAMD8Q8IZJ3 1885 aa9.11□□□□□ -0.95
CHFR-219ENST00000541341 A0A1B0GTH9 108 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 LINC00587B1AMM8 73 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 CDC14BO60729 498 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 KLF7O75840 302 aaPredicted RBP9.1□□□□□ -0.95
CHFR-219ENST00000541341 OR2C1O95371 312 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 PRH1P02810 166 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 SERPINA5P05154 406 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 SNRNP70P08621 437 aaKnown RBP9.1□□□□□ -0.95
CHFR-219ENST00000541341 CCL1P22362 96 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 DTYMKP23919 212 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 DUSP1P28562 367 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 THBS4P35443 961 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 TAGLN2P37802 199 aaKnown RBP9.1□□□□□ -0.95
CHFR-219ENST00000541341 FOLR3P41439 243 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 LPAR6P43657 344 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 SULT1A1P50225 295 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 RRADP55042 308 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 MTCP1P56278 107 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 SLC37A1P57057 533 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 AWAT1Q58HT5 328 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 IGSF11Q5DX21 431 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 KRBOX4Q5JUW0 171 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 RPL7L1Q6DKI1 246 aaKnown RBP9.1□□□□□ -0.95
CHFR-219ENST00000541341 GLIPR1L1Q6UWM5 242 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 BIVMQ86UB2 503 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 LGI3Q8N145 548 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 ASB10Q8WXI3 467 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 SLC25A36Q96CQ1 311 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 RRNAD1Q96FB5 475 aaKnown RBP9.1□□□□□ -0.95
CHFR-219ENST00000541341 CLCC1Q96S66 551 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 GPER1Q99527 375 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 GAL3ST1Q99999 423 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 MESP1Q9BRJ9 268 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 OR11A1Q9GZK7 315 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 LPAR5Q9H1C0 372 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 C19orf12Q9NSK7 152 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 FAM206AQ9NX38 181 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 GSKIPQ9P0R6 139 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 NXT1Q9UKK6 140 aaKnown RBP9.1□□□□□ -0.95
CHFR-219ENST00000541341 COA3Q9Y2R0 106 aaPredicted RBP9.1□□□□□ -0.95
CHFR-219ENST00000541341 CLDN16Q9Y5I7 305 aa9.1□□□□□ -0.95
CHFR-219ENST00000541341 CSMD1Q96PZ7 3565 aa9.09□□□□□ -0.95
CHFR-219ENST00000541341 IGKV3D-11A0A0A0MRZ8 115 aa9.09□□□□□ -0.95
CHFR-219ENST00000541341 A0A1W2PNV4 684 aa9.09□□□□□ -0.95
CHFR-219ENST00000541341 DHRS7CA6NNS2 312 aa9.09□□□□□ -0.95
CHFR-219ENST00000541341 FAM157AC9JC47 383 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms