RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 PHF1O43189 567 aaPredicted RBP12.91□□□□□ -0.34
DDB1-218ENST00000540784 NDUFB3O43676 98 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 KDM4BO94953 1096 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 KNG1P01042 644 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 CALCBP10092 127 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 JUNBP17275 347 aaPredicted RBP12.91□□□□□ -0.34
DDB1-218ENST00000540784 AMY2BP19961 511 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 ZFP36P26651 326 aaKnown RBP12.91□□□□□ -0.34
DDB1-218ENST00000540784 CALRP27797 417 aaKnown RBP12.91□□□□□ -0.34
DDB1-218ENST00000540784 OR3A4PP47883 348 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 NPY4RP50391 375 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 SEC61A1P61619 476 aaKnown RBP12.91□□□□□ -0.34
DDB1-218ENST00000540784 KRTAP1-1Q07627 177 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 RSU1Q15404 277 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 WDR25Q64LD2 544 aaPredicted RBP12.91□□□□□ -0.34
DDB1-218ENST00000540784 GLT8D1Q68CQ7 371 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 FAM166AQ6J272 317 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 ASCL4Q6XD76 172 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 ZNF841Q6ZN19 808 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 ZNF788Q6ZQV5 615 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 LRRTM1Q86UE6 522 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 NKAIN3Q8N8D7 197 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 METTL9Q9H1A3 318 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 HMG20AQ9NP66 347 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 PCDHB16Q9NRJ7 776 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 RBFOX1Q9NWB1 397 aaKnown RBP12.91□□□□□ -0.34
DDB1-218ENST00000540784 OR14J1Q9UGF5 321 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 GLS2Q9UI32 602 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 STUB1Q9UNE7 303 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 SSR3Q9UNL2 185 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 TRAV20A0A0B4J274 112 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 DVL1O14640 695 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 CDRT1O95170 752 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 TFF1P04155 84 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 SFTPBP07988 381 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 CD36P16671 472 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 PRKACAP17612 351 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 ADRA2CP18825 462 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 BMXP51813 675 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 DVL1P1P54792 670 aaPredicted RBP12.9□□□□□ -0.34
DDB1-218ENST00000540784 IL13RA1P78552 427 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 LRRC10Q5BKY1 277 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 CD276Q5ZPR3 534 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 Q71RC1 249 aaPredicted RBP12.9□□□□□ -0.34
DDB1-218ENST00000540784 GLCCI1Q86VQ1 547 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 CD177Q8N6Q3 437 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 FAM216BQ8N7L0 139 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 TMEM186Q96B77 213 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 SDSLQ96GA7 329 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 NKX3-1Q99801 234 aaPredicted RBP12.9□□□□□ -0.34
DDB1-218ENST00000540784 UQCC2Q9BRT2 126 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 CNTD2Q9H8S5 307 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 EXOSC4Q9NPD3 245 aaKnown RBP12.9□□□□□ -0.34
DDB1-218ENST00000540784 CTSZQ9UBR2 303 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 GSTK1Q9Y2Q3 226 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 ZNF469Q96JG9 3925 aaPredicted RBP12.9□□□□□ -0.34
DDB1-218ENST00000540784 ACANP16112 2415 aa12.9□□□□□ -0.34
DDB1-218ENST00000540784 CR1P17927 2039 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 LOC105371242A0A075B767 164 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 A8MV72 311 aaPredicted RBP12.89□□□□□ -0.35
DDB1-218ENST00000540784 SH2D1BO14796 132 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 SIGLEC5O15389 551 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 HTR3BO95264 441 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 CHRM2P08172 466 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 ZNF16P17020 682 aaPredicted RBP12.89□□□□□ -0.35
DDB1-218ENST00000540784 FGF9P31371 208 aaPredicted RBP12.89□□□□□ -0.35
DDB1-218ENST00000540784 MTNR1BP49286 362 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 PSMD7P51665 324 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 IKZF1Q13422 519 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 GPR176Q14439 515 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 C22orf42Q6IC83 251 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 GAFA1Q96PS6 74 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 OR51E2Q9H255 320 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 SEBOXQ9HB31 216 aaPredicted RBP12.89□□□□□ -0.35
DDB1-218ENST00000540784 HIF1ANQ9NWT6 349 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 OR5V1Q9UGF6 321 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 ZNF222Q9UK12 451 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 KCNS2Q9ULS6 477 aa12.89□□□□□ -0.35
DDB1-218ENST00000540784 MRPS28Q9Y2Q9 187 aaKnown RBP12.89□□□□□ -0.35
DDB1-218ENST00000540784 POLR3KQ9Y2Y1 108 aaPredicted RBP12.89□□□□□ -0.35
DDB1-218ENST00000540784 TRAV1-2A0A0B4J238 106 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 A0A1B0GW55 424 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 KIAA1324LA8MWY0 1029 aaPredicted RBP12.88□□□□□ -0.35
DDB1-218ENST00000540784 A8MXK9 166 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 PDCD5O14737 125 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 GPR37O15354 613 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 ZNF780AO75290 641 aaPredicted RBP12.88□□□□□ -0.35
DDB1-218ENST00000540784 ECDO95905 644 aaPredicted RBP12.88□□□□□ -0.35
DDB1-218ENST00000540784 CSTBP04080 98 aaKnown RBP12.88□□□□□ -0.35
DDB1-218ENST00000540784 DUX4L2P0CJ85 424 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 DUX4L3P0CJ86 424 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 DUX4L4P0CJ87 422 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 DUX4L5P0CJ88 424 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 DUX4L6P0CJ89 424 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 DUX4L7P0CJ90 424 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 MYL9P24844 172 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 DUSP1P28562 367 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 CEBPDP49716 269 aaPredicted RBP12.88□□□□□ -0.35
DDB1-218ENST00000540784 CAPZA1P52907 286 aa12.88□□□□□ -0.35
DDB1-218ENST00000540784 SNU13P55769 128 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms