RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 TRIM77I1YAP6 450 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 ANGPTL7O43827 346 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 KNG1P01042 644 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 IGKV1D-12P01611 117 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 BCL3P20749 454 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 AQP4P55087 323 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 ST3GAL4Q11206 333 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 BAMBIQ13145 260 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 PDCD1Q15116 288 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 LHFPL2Q6ZUX7 228 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 ZNF561Q8N587 486 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 ZNF485Q8NCK3 441 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 OR5D18Q8NGL1 313 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 FAM216AQ8WUB2 273 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 GATAD2BQ8WXI9 593 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 SPSB1Q96BD6 273 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 ZCCHC4Q9H5U6 513 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 EXOSC1Q9Y3B2 195 aaKnown RBP12.37□□□□□ -0.43
UBE3B-212ENST00000540230 IGHV1-69DA0A0B4J2H0 117 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 A0A1W2PQ09 198 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 IRGMA1A4Y4 181 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 RNASEK-C17orf49H0YIS7 233 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 SLC1A7O00341 560 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 IGHV1-69P01742 117 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 MT-ND2P03891 347 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 MYL12AP19105 171 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 PRKACBP22694 351 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 SOX2P48431 317 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 COL10A1Q03692 680 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 RBMS3Q6XE24 437 aaKnown RBP12.37□□□□□ -0.43
UBE3B-212ENST00000540230 AHSA2Q719I0 299 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 FAM185AQ8N0U4 392 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 PARP16Q8N5Y8 322 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 KIR3DL3Q8N743 410 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 ZFP41Q8N8Y5 198 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 BPIFB6Q8NFQ5 453 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 OR4M1Q8NGD0 313 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 OR51A2Q8NGJ7 313 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 OR13C5Q8NGS8 318 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 TSEN15Q8WW01 171 aaKnown RBP12.37□□□□□ -0.43
UBE3B-212ENST00000540230 TAF15Q92804 592 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBE3B-212ENST00000540230 TNFRSF14Q92956 283 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 EMG1Q92979 244 aaKnown RBP12.37□□□□□ -0.43
UBE3B-212ENST00000540230 PSORS1C1Q9UIG5 152 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 DHDHQ9UQ10 334 aa12.37□□□□□ -0.43
UBE3B-212ENST00000540230 MEX3AA1L020 520 aaKnown RBP12.36□□□□□ -0.43
UBE3B-212ENST00000540230 ZNF737O75373 536 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 TK1P04183 234 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 PIPP12273 146 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-212ENST00000540230 PRTN3P24158 256 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 DUSP1P28562 367 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 C21orf33P30042 268 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-212ENST00000540230 SNU13P55769 128 aaKnown RBP12.36□□□□□ -0.43
UBE3B-212ENST00000540230 ACTG1P63261 375 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 PDZK1IP1Q13113 114 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 SLC9A3R2Q15599 337 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 RPL22L1Q6P5R6 122 aaKnown RBP12.36□□□□□ -0.43
UBE3B-212ENST00000540230 TMPRSS11AQ6ZMR5 421 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 PNKDQ8N490 385 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 ORAI1Q96D31 301 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 DMRTB1Q96MA1 342 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 NKX3-1Q99801 234 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-212ENST00000540230 VCXQ9H320 206 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 BABAM2Q9NXR7 383 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 DSCAML1Q8TD84 2053 aa12.36□□□□□ -0.43
UBE3B-212ENST00000540230 TENM1Q9UKZ4 2725 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 TRBV23-1A0A0A0MS06 115 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 A0A0U1RQK1 487 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 A0A1W2PRD5 423 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 A0A1W2PRF3 423 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 A0A1W2PRM7 423 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 TMEM82A0PJX8 343 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 OGG1O15527 345 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 HOXA3O43365 443 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-212ENST00000540230 SULT1B1O43704 296 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 OCM2P0CE71 109 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 OCMP0CE72 109 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-212ENST00000540230 ERVFRD-1P60508 538 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 ZP1P60852 638 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 ZNF273Q14593 569 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 CCDC58Q4VC31 144 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 SERPINA12Q8IW75 414 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 MKXQ8IYA7 352 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 ASCC1Q8N9N2 400 aaKnown RBP12.35□□□□□ -0.43
UBE3B-212ENST00000540230 OR52N1Q8NH53 320 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 HAVCR2Q8TDQ0 301 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 SMIM19Q96E16 107 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 PRDM13Q9H4Q3 707 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 PLCXD1Q9NUJ7 323 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 FKBP14Q9NWM8 211 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 TAS2R4Q9NYW5 299 aa12.35□□□□□ -0.43
UBE3B-212ENST00000540230 CNOT2Q9NZN8 540 aaKnown RBP12.35□□□□□ -0.43
UBE3B-212ENST00000540230 EFCAB10A6NFE3 127 aa12.34□□□□□ -0.43
UBE3B-212ENST00000540230 K7N7A8 449 aa12.34□□□□□ -0.43
UBE3B-212ENST00000540230 M0R1W7 72 aa12.34□□□□□ -0.43
UBE3B-212ENST00000540230 HCKP08631 526 aa12.34□□□□□ -0.43
UBE3B-212ENST00000540230 CCL3L1P16619 93 aa12.34□□□□□ -0.43
UBE3B-212ENST00000540230 PRKACAP17612 351 aa12.34□□□□□ -0.43
UBE3B-212ENST00000540230 BPIFB3P59826 476 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms