RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 FGFRL1Q8N441 504 aa11.06□□□□□ -0.64
CCDC130-202ENST00000540216 CD177Q8N6Q3 437 aa11.06□□□□□ -0.64
CCDC130-202ENST00000540216 ZNRF1Q8ND25 227 aa11.06□□□□□ -0.64
CCDC130-202ENST00000540216 H1FXQ92522 213 aaKnown RBP11.06□□□□□ -0.64
CCDC130-202ENST00000540216 RGP1Q92546 391 aaPredicted RBP11.06□□□□□ -0.64
CCDC130-202ENST00000540216 MYDGFQ969H8 173 aa11.06□□□□□ -0.64
CCDC130-202ENST00000540216 SLAMF9Q96A28 289 aa11.06□□□□□ -0.64
CCDC130-202ENST00000540216 PCGF1Q9BSM1 259 aa11.06□□□□□ -0.64
CCDC130-202ENST00000540216 ANKRD60Q9BZ19 345 aa11.06□□□□□ -0.64
CCDC130-202ENST00000540216 FAM234AQ9H0X4 552 aa11.06□□□□□ -0.64
CCDC130-202ENST00000540216 SCN3BQ9NY72 215 aa11.06□□□□□ -0.64
CCDC130-202ENST00000540216 ZNF69Q9UC07 566 aa11.06□□□□□ -0.64
CCDC130-202ENST00000540216 ZNF281Q9Y2X9 895 aa11.06□□□□□ -0.64
CCDC130-202ENST00000540216 FBN1P35555 2871 aaKnown RBP11.06□□□□□ -0.64
CCDC130-202ENST00000540216 TFF1P04155 84 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 CHRM2P08172 466 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 HCKP08631 526 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 IGHV4-38-2P0DP08 117 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 RAB3AP20336 220 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 MYF6P23409 242 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 CAPZA1P52907 286 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 WNT4P56705 351 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 KRTAP24-1Q3LI83 254 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 YIF1BQ5BJH7 314 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 ZNF529Q6P280 563 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 IZUMO2Q6UXV1 221 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 SAXO1Q8IYX7 474 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 ZSCAN4Q8NAM6 433 aaPredicted RBP11.05□□□□□ -0.64
CCDC130-202ENST00000540216 GHSRQ92847 366 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 EMG1Q92979 244 aaKnown RBP11.05□□□□□ -0.64
CCDC130-202ENST00000540216 TMEM106AQ96A25 262 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 TBX15Q96SF7 602 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 ONECUT1Q9UBC0 465 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 ERGIC3Q9Y282 383 aa11.05□□□□□ -0.64
CCDC130-202ENST00000540216 A0A1W2PPH5 198 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 A0A1W2PQ09 198 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 TRIM77I1YAP6 450 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 M0R1W7 72 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 MAGEB3O15480 346 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 VENTXO95231 258 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 ATP6V1G2O95670 118 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 LALBAP00709 142 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 CD1AP06126 327 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 CDK1P06493 297 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 SFTPBP07988 381 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 C21orf33P30042 268 aaPredicted RBP11.04□□□□□ -0.64
CCDC130-202ENST00000540216 SOX2P48431 317 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 ARF6P62330 175 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 BDH1Q02338 343 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 BLMHQ13867 455 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 SPIN3Q5JUX0 258 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 METAP1DQ6UB28 335 aaPredicted RBP11.04□□□□□ -0.64
CCDC130-202ENST00000540216 C1orf122Q6ZSJ8 110 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 FAM58AQ8N1B3 248 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 NANOGP1Q8N7R0 232 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 SPATA3Q8NHX4 192 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 TBC1D15Q8TC07 691 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 C22orf15Q8WYQ4 148 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 THRSPQ92748 146 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 CDCA4Q9BXL8 241 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 ZMAT3Q9HA38 289 aaKnown RBP11.04□□□□□ -0.64
CCDC130-202ENST00000540216 OR14J1Q9UGF5 321 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 GLS2Q9UI32 602 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 TPRKBQ9Y3C4 175 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 PCDHGB5Q9Y5G0 923 aa11.04□□□□□ -0.64
CCDC130-202ENST00000540216 SIRT4Q9Y6E7 314 aaPredicted RBP11.04□□□□□ -0.64
CCDC130-202ENST00000540216 TRBV5-5A0A0J9YX44 114 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 F8VVB4 439 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 F8VWA3 439 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 K7N7A8 449 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 SPRY1O43609 319 aaPredicted RBP11.03□□□□□ -0.64
CCDC130-202ENST00000540216 KDM4BO94953 1096 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 TK1P04183 234 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 BCL3P20749 454 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 BMXP51813 675 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 RPL31P62899 125 aaKnown RBP11.03□□□□□ -0.64
CCDC130-202ENST00000540216 PPP3R1P63098 170 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 GUCA2AQ02747 115 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 KISS1Q15726 138 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 Q499Y3 187 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 VMO1Q7Z5L0 202 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 BATF2Q8N1L9 274 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 SIGLECL1Q8N7X8 197 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 ASCC1Q8N9N2 400 aaKnown RBP11.03□□□□□ -0.64
CCDC130-202ENST00000540216 PGLYRP3Q96LB9 341 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 MND1Q9BWT6 205 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 METTL8Q9H825 291 aaKnown RBP11.03□□□□□ -0.64
CCDC130-202ENST00000540216 ELL3Q9HB65 397 aaPredicted RBP11.03□□□□□ -0.64
CCDC130-202ENST00000540216 TMEM138Q9NPI0 162 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 RBFOX1Q9NWB1 397 aaKnown RBP11.03□□□□□ -0.64
CCDC130-202ENST00000540216 CKLFQ9UBR5 152 aa11.03□□□□□ -0.64
CCDC130-202ENST00000540216 IGHV3OR16-10A0A075B7F0 116 aa11.02□□□□□ -0.65
CCDC130-202ENST00000540216 IGHV1-69DA0A0B4J2H0 117 aa11.02□□□□□ -0.65
CCDC130-202ENST00000540216 PTGES3LE9PB15 166 aa11.02□□□□□ -0.65
CCDC130-202ENST00000540216 ZNF737O75373 536 aa11.02□□□□□ -0.65
CCDC130-202ENST00000540216 RGS9O75916 674 aaPredicted RBP11.02□□□□□ -0.65
CCDC130-202ENST00000540216 HAND1O96004 215 aa11.02□□□□□ -0.65
CCDC130-202ENST00000540216 IGHV1-69P01742 117 aa11.02□□□□□ -0.65
CCDC130-202ENST00000540216 ALDOBP05062 364 aa11.02□□□□□ -0.65
CCDC130-202ENST00000540216 TMEM225BP0DP42 221 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms