RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 OR4A8P0C604 315 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 OR5G3P0C626 314 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 SOX3P41225 446 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 SRSF3P84103 164 aaKnown RBP11.09□□□□□ -0.63
DDX55-206ENST00000539934 BAXQ07812 192 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 MELKQ14680 651 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 SSX1Q16384 188 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 MFSD12Q6NUT3 480 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 INO80CQ6PI98 192 aaPredicted RBP11.09□□□□□ -0.63
DDX55-206ENST00000539934 WDR53Q7Z5U6 358 aaPredicted RBP11.09□□□□□ -0.63
DDX55-206ENST00000539934 HMGN2P46Q86SG4 172 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 SHISA5Q8N114 240 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 GTPBP8Q8N3Z3 284 aaPredicted RBP11.09□□□□□ -0.63
DDX55-206ENST00000539934 SLC5A8Q8N695 610 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 OR1J1Q8NGS3 322 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 APOBEC4Q8WW27 367 aaKnown RBP11.09□□□□□ -0.63
DDX55-206ENST00000539934 TMEM239Q8WW34 195 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 ALG12Q9BV10 488 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 FN3KRPQ9HA64 309 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 LRIT1Q9P2V4 623 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 USP9YO00507 2555 aaPredicted RBP11.09□□□□□ -0.63
DDX55-206ENST00000539934 E9PQ18 207 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 KITLGP21583 273 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 ZNF345Q14585 488 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 PRTGQ2VWP7 1150 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 AWAT1Q58HT5 328 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 PDZD11Q5EBL8 140 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 ZNF730Q6ZMV8 503 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 OR2L13Q8N349 312 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 ZSCAN4Q8NAM6 433 aaPredicted RBP11.09□□□□□ -0.63
DDX55-206ENST00000539934 OR51L1Q8NGJ5 315 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 DOK4Q8TEW6 326 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 ARHGDIGQ99819 225 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 RSPO3Q9BXY4 272 aaPredicted RBP11.09□□□□□ -0.63
DDX55-206ENST00000539934 RTN4RQ9BZR6 473 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 TMEM27Q9HBJ8 222 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 OR6C3Q9NZP0 311 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 ABI3Q9P2A4 366 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 IKZF2Q9UKS7 526 aa11.09□□□□□ -0.63
DDX55-206ENST00000539934 SYT7O43581 403 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 CSO75390 466 aaKnown RBP11.08□□□□□ -0.64
DDX55-206ENST00000539934 ATP1B1P05026 303 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 SCG5P05408 212 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 SULT1A1P50225 295 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 SRSF6Q13247 344 aaKnown RBP11.08□□□□□ -0.64
DDX55-206ENST00000539934 TRMT12Q53H54 448 aaKnown RBP11.08□□□□□ -0.64
DDX55-206ENST00000539934 PRSS54Q6PEW0 395 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 ZFP41Q8N8Y5 198 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 SLC38A9Q8NBW4 561 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 SLC16A11Q8NCK7 471 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 OR10X1Q8NGY0 326 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 SLC35A4Q96G79 324 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 CHRDL1Q9BU40 450 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 CDCA4Q9BXL8 241 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 CHIAQ9BZP6 476 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 FGF21Q9NSA1 209 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 RLIMQ9NVW2 624 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 CBLCQ9ULV8 474 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 SPTBN1Q01082 2364 aaKnown RBP11.08□□□□□ -0.64
DDX55-206ENST00000539934 CSMD1Q96PZ7 3565 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 IGHV5-51A0A0C4DH38 117 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 NKX2-6A6NCS4 301 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 PPP5D1E7EU14 171 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 ARPC1BO15143 372 aaKnown RBP11.08□□□□□ -0.64
DDX55-206ENST00000539934 RBFOX2O43251 390 aaKnown RBP eCLIP11.08□□□□□ -0.64
DDX55-206ENST00000539934 RAD51DO75771 328 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 CDRT1O95170 752 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 CNIH1O95406 144 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 HPXP02790 462 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 ACP1P24666 158 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 HMGA2P52926 109 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 BIDP55957 195 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 NAAAQ02083 359 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 ST3GAL3Q11203 375 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 OR2T2Q6IF00 324 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 ZNF585AQ6P3V2 769 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 OR4D11Q8NGI4 311 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 SPRYD4Q8WW59 207 aaPredicted RBP11.08□□□□□ -0.64
DDX55-206ENST00000539934 KCTD12Q96CX2 325 aaKnown RBP11.08□□□□□ -0.64
DDX55-206ENST00000539934 GABARAPL3Q9BY60 117 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 ZNF552Q9H707 407 aaPredicted RBP11.08□□□□□ -0.64
DDX55-206ENST00000539934 MED20Q9H944 212 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 RASD1Q9Y272 281 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 MRPS33Q9Y291 106 aaKnown RBP11.08□□□□□ -0.64
DDX55-206ENST00000539934 HDGFL3Q9Y3E1 203 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 RFNGQ9Y644 331 aa11.08□□□□□ -0.64
DDX55-206ENST00000539934 CREBBPQ92793 2442 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 E5RGE8 158 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 FFAR1O14842 300 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 H1F0P07305 194 aaKnown RBP11.07□□□□□ -0.64
DDX55-206ENST00000539934 ADRA2AP08913 450 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 OMGP23515 440 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 CRYBB2P43320 205 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 GATA4P43694 442 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 CAV2P51636 162 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 PDX1P52945 283 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 OR1D5P58170 312 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 TAS2R41P59536 307 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 ELAVL1Q15717 326 aaKnown RBP11.07□□□□□ -0.64
DDX55-206ENST00000539934 OR2G6Q5TZ20 316 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms