RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TCN2P20062 427 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 CBX5P45973 191 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 MRPS34P82930 218 aaKnown RBP12.19□□□□□ -0.46
UBE3B-210ENST00000539599 PPP1R32Q7Z5V6 425 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 AQP10Q96PS8 301 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 METTL9Q9H1A3 318 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 TMEM100Q9NV29 134 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 DUX4Q9UBX2 424 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 ST3GAL6Q9Y274 331 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 CCDC163A0A0D9SF12 145 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 NRASP01111 189 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 DUSP1P28562 367 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 RPL12P30050 165 aaKnown RBP12.18□□□□□ -0.46
UBE3B-210ENST00000539599 FCGR2CP31995 323 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 ALDH3B1P43353 468 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 IGSF11Q5DX21 431 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 PLCXD3Q63HM9 321 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 FAM122CQ6P4D5 195 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 CPEB3Q8NE35 698 aaKnown RBP12.18□□□□□ -0.46
UBE3B-210ENST00000539599 OR52M1Q8NGK5 317 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 FNDC9Q8TBE3 224 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 ARL11Q969Q4 196 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 FOXB1Q99853 325 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 OR51B6Q9H340 312 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 LPAR3Q9UBY5 353 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 GLS2Q9UI32 602 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 P04436 131 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 OR8U9P0C7N5 309 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 GDF1P27539 372 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 TMEM33P57088 247 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 FAM3AP98173 230 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 SCRN3Q0VDG4 424 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 DAZAP2Q15038 168 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-210ENST00000539599 C3AR1Q16581 482 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 MEX3BQ6ZN04 569 aaKnown RBP12.18□□□□□ -0.46
UBE3B-210ENST00000539599 VASH2Q86V25 355 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 ZFP82Q8N141 532 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 GPR137CQ8N3F9 429 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 OR8U1Q8NH10 309 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 CNTNAP3BQ96NU0 1288 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 CNTNAP3Q9BZ76 1288 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 RHOFQ9HBH0 211 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.18□□□□□ -0.46
UBE3B-210ENST00000539599 ZNF503-AS2A6NEH8 195 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 NTN3O00634 580 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-210ENST00000539599 VAMP5O95183 116 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 RBP2P50120 134 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 RAC3P60763 192 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 ZFP36L1Q07352 338 aaKnown RBP12.18□□□□□ -0.46
UBE3B-210ENST00000539599 RAB35Q15286 201 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 NSUN5P2Q63ZY6 315 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 SGPP2Q8IWX5 399 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 SUMF1Q8NBK3 374 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 OR5T2Q8NGG2 359 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 M1APQ8TC57 530 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 ADAMTS17Q8TE56 1095 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 CDX2Q99626 313 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-210ENST00000539599 UQCC1Q9NVA1 299 aa12.18□□□□□ -0.46
UBE3B-210ENST00000539599 BDP1A6H8Y1 2624 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 CRYM-AS1A6NIL9 109 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 K7EPK0 472 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 OR7C1O76099 320 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-210ENST00000539599 MBPP02686 304 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-210ENST00000539599 CHATP28329 748 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 CD80P33681 288 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 HAGHLQ6PII5 290 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-210ENST00000539599 FAM71E2Q8N5Q1 922 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 RHBDD1Q8TEB9 315 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 C2CD4CQ8TF44 421 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 RTN4IP1Q8WWV3 396 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-210ENST00000539599 PAPOLGQ9BWT3 736 aaKnown RBP12.17□□□□□ -0.46
UBE3B-210ENST00000539599 OR2H1Q9GZK4 316 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 PCDHB16Q9NRJ7 776 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 C1orf123Q9NWV4 160 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 AMDHD2Q9Y303 409 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 NME2P1O60361 137 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 LYL1P12980 280 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 ZNF133P52736 654 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-210ENST00000539599 TGIF1Q15583 401 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 SLC25A26Q70HW3 274 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 SH3BGRL3Q9H299 93 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 WFDC1Q9HC57 220 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 ZDHHC8Q9ULC8 765 aa12.17□□□□□ -0.46
UBE3B-210ENST00000539599 RCL1Q9Y2P8 373 aaKnown RBP12.17□□□□□ -0.46
UBE3B-210ENST00000539599 RAB19A4D1S5 217 aa12.16□□□□□ -0.46
UBE3B-210ENST00000539599 HLA-HP01893 362 aa12.16□□□□□ -0.46
UBE3B-210ENST00000539599 ZNF728P0DKX0 622 aa12.16□□□□□ -0.46
UBE3B-210ENST00000539599 PABPC1L2AQ5JQF8 200 aa12.16□□□□□ -0.46
UBE3B-210ENST00000539599 Q6ZRG5 221 aa12.16□□□□□ -0.46
UBE3B-210ENST00000539599 SCGB3A2Q96PL1 93 aa12.16□□□□□ -0.46
UBE3B-210ENST00000539599 FGF23Q9GZV9 251 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-210ENST00000539599 GHRLQ9UBU3 117 aa12.16□□□□□ -0.46
UBE3B-210ENST00000539599 PURGQ9UJV8 347 aaKnown RBP12.16□□□□□ -0.46
UBE3B-210ENST00000539599 TNRC6BQ9UPQ9 1833 aaKnown RBP12.16□□□□□ -0.46
UBE3B-210ENST00000539599 ABCA11PQ4W5N1 156 aa12.16□□□□□ -0.46
UBE3B-210ENST00000539599 ACER2Q5QJU3 275 aa12.16□□□□□ -0.46
UBE3B-210ENST00000539599 CCDC36Q8IYA8 594 aa12.16□□□□□ -0.46
UBE3B-210ENST00000539599 PLA2G3Q9NZ20 509 aa12.16□□□□□ -0.46
UBE3B-210ENST00000539599 TCFL5Q9UL49 500 aa12.16□□□□□ -0.46
UBE3B-210ENST00000539599 IGHV3-64DA0A0J9YX35 117 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms