RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 ZNF727A8MUV8 499 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 E5RGE8 158 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 ATXN7O15265 892 aaPredicted RBP17.67■□□□□ 0.42
TMEM260-203ENST00000539559 IGHV2-5P01817 119 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 SLC35A1P78382 337 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 TMEM187Q14656 261 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 CLINT1Q14677 625 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 FAM189A2Q15884 450 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 SLAMF9Q96A28 289 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 ZNF385AQ96PM9 386 aaKnown RBP17.67■□□□□ 0.42
TMEM260-203ENST00000539559 RBM24Q9BX46 236 aaKnown RBP17.67■□□□□ 0.42
TMEM260-203ENST00000539559 PRDM6Q9NQX0 595 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 METTL1Q9UBP6 276 aaKnown RBP17.67■□□□□ 0.42
TMEM260-203ENST00000539559 NSG2Q9Y328 171 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 CCDC187A0A096LP49 1063 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 ZNF728P0DKX0 622 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 MEX3BQ6ZN04 569 aaKnown RBP17.67■□□□□ 0.42
TMEM260-203ENST00000539559 CPEB2Q7Z5Q1 589 aaKnown RBP17.67■□□□□ 0.42
TMEM260-203ENST00000539559 SLC25A45Q8N413 288 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 SUMF1Q8NBK3 374 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 HPSE2Q8WWQ2 592 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 SGK3Q96BR1 496 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 Q96M66 194 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 WDR77Q9BQA1 342 aaPredicted RBP17.67■□□□□ 0.42
TMEM260-203ENST00000539559 CHST5Q9GZS9 411 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 PLEKHA2Q9HB19 425 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 KCNJ16Q9NPI9 418 aa17.67■□□□□ 0.42
TMEM260-203ENST00000539559 DUX1O43812 170 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 YIF1AO95070 293 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 OMGP23515 440 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 ENDOGQ14249 297 aaKnown RBP17.66■□□□□ 0.42
TMEM260-203ENST00000539559 GPHA2Q96T91 129 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 NAA60Q9H7X0 242 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 PISDQ9UG56 409 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 MMP24Q9Y5R2 645 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 FRYLO94915 3013 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 CCDC163A0A0D9SF12 145 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 CDRT15L2A8MXV6 281 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 GLB1P16278 677 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 PIGYQ3MUY2 71 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 FBXW12Q6X9E4 464 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 SLC16A14Q7RTX9 510 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 CARFQ8N187 725 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 LINC00469Q8N7U9 141 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 ARV1Q9H2C2 271 aa17.66■□□□□ 0.42
TMEM260-203ENST00000539559 IGKV1-27A0A075B6S5 117 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 BORCS7-ASMTA0A0B4J1R7 106 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 SEC11BP0C7V7 166 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 P2RY1P47900 373 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 CSNK1A1P48729 337 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 HMGN3Q15651 99 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 HIST3H3Q16695 136 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 DEFB123Q8N688 67 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 UCN2Q96RP3 112 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 IER2Q9BTL4 223 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 PLEK2Q9NYT0 353 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 KCNIP3Q9Y2W7 256 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 G3V3Y1 287 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 ALDH3B1P43353 468 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 OR2M3Q8NG83 312 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 SLC22A8Q8TCC7 542 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 TAAR9Q96RI9 348 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 GINS3Q9BRX5 216 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 TINAGQ9UJW2 476 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 V9GYS6 101 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 IGLV3-1P01715 115 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 RGS19P49795 217 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 RSU1Q15404 277 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 SLC22A25Q6T423 547 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 WDSUB1Q8N9V3 476 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 SLC2A9Q9NRM0 540 aa17.65■□□□□ 0.42
TMEM260-203ENST00000539559 FAM24AA6NFZ4 105 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 C19orf67A6NJJ6 358 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 M0R135 149 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 GEMIN2O14893 280 aaKnown RBP17.64■□□□□ 0.41
TMEM260-203ENST00000539559 PHF1O43189 567 aaPredicted RBP17.64■□□□□ 0.41
TMEM260-203ENST00000539559 GPR137BO60478 399 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 NXPH3O95157 252 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 FBP1P09467 338 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 MSR1P21757 451 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 GUCA1AP43080 201 aaPredicted RBP17.64■□□□□ 0.41
TMEM260-203ENST00000539559 RPS23P62266 143 aaKnown RBP17.64■□□□□ 0.41
TMEM260-203ENST00000539559 NSUN5P2Q63ZY6 315 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 CDPF1Q6NVV7 123 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 ZNF799Q96GE5 643 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 SLC35B3Q9H1N7 401 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 OR51M1Q9H341 326 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 AKIRIN1Q9H9L7 192 aaPredicted RBP17.64■□□□□ 0.41
TMEM260-203ENST00000539559 AP4M1O00189 453 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 ONECUT2O95948 504 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 NKAIN1Q4KMZ8 207 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 ZFP62Q8NB50 900 aaPredicted RBP17.64■□□□□ 0.41
TMEM260-203ENST00000539559 MYOTQ9UBF9 498 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 CELSR3Q9NYQ7 3312 aa17.64■□□□□ 0.41
TMEM260-203ENST00000539559 NSG1A0A0A6YYJ2 146 aa17.63■□□□□ 0.41
TMEM260-203ENST00000539559 AQP7P3A6NL99 342 aa17.63■□□□□ 0.41
TMEM260-203ENST00000539559 RRP8O43159 456 aaKnown RBP17.63■□□□□ 0.41
TMEM260-203ENST00000539559 OR2C1O95371 312 aa17.63■□□□□ 0.41
TMEM260-203ENST00000539559 PATE4P0C8F1 98 aa17.63■□□□□ 0.41
TMEM260-203ENST00000539559 RPS10P46783 165 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms