RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 DUX4L6P0CJ89 424 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 DUX4L7P0CJ90 424 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 PRKACBP22694 351 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 HTR2CP28335 458 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 GPR6P46095 362 aaPredicted RBP10.87□□□□□ -0.67
CCDC42-202ENST00000539522 HAAOP46952 286 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 FUT6P51993 359 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 RAB11BQ15907 218 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 FAM166AQ6J272 317 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 DUX4L9Q6RFH8 374 aaPredicted RBP10.87□□□□□ -0.67
CCDC42-202ENST00000539522 METAP1DQ6UB28 335 aaPredicted RBP10.87□□□□□ -0.67
CCDC42-202ENST00000539522 LYPD2Q6UXB3 125 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 CCDC190Q86UF4 302 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 LRRC28Q86X40 367 aaPredicted RBP10.87□□□□□ -0.67
CCDC42-202ENST00000539522 OR6M1Q8NGM8 313 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 CLDND2Q8NHS1 167 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 LRRC29Q8WV35 223 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 SPSB1Q96BD6 273 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 DIRAS2Q96HU8 199 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 COX4I2Q96KJ9 171 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 PIMREGQ9BSJ6 248 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 MIXL1Q9H2W2 232 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 HES4Q9HCC6 221 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 RNF7Q9UBF6 113 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 DUX4Q9UBX2 424 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 SLC7A11Q9UPY5 501 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 ETV7Q9Y603 341 aa10.87□□□□□ -0.67
CCDC42-202ENST00000539522 IGHV3OR15-7A0A075B7D8 119 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 A6NLC8 198 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 J3QT63 122 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 SPRY1O43609 319 aaPredicted RBP10.86□□□□□ -0.67
CCDC42-202ENST00000539522 HPGDSO60760 199 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 FSTL3O95633 263 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 APOA1P02647 267 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 PGA5P0DJD9 388 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 SLC25A16P16260 332 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 PTBP1P26599 531 aaKnown RBP eCLIP10.86□□□□□ -0.67
CCDC42-202ENST00000539522 ZNF93P35789 620 aaPredicted RBP10.86□□□□□ -0.67
CCDC42-202ENST00000539522 NPBWR2P48146 333 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 SEC61A1P61619 476 aaKnown RBP10.86□□□□□ -0.67
CCDC42-202ENST00000539522 BTG1P62324 171 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 LOXL1Q08397 574 aaPredicted RBP10.86□□□□□ -0.67
CCDC42-202ENST00000539522 C2orf76Q3KRA6 126 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 TEX36Q5VZQ5 186 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 SFRP4Q6FHJ7 346 aaPredicted RBP10.86□□□□□ -0.67
CCDC42-202ENST00000539522 FAM90A1Q86YD7 464 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 FGFRL1Q8N441 504 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 JAGN1Q8N5M9 183 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 SAMD12Q8N8I0 201 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 POC1AQ8NBT0 407 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 OR5D18Q8NGL1 313 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 SLC25A28Q96A46 364 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 BORCS8Q96FH0 119 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 SMR3AQ99954 134 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 NRIP2Q9BQI9 281 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 TMEM246Q9BRR3 403 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 PKIBQ9C010 78 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 NARFLQ9H6Q4 476 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 LIN7BQ9HAP6 207 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 IL36RNQ9UBH0 155 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 CTSZQ9UBR2 303 aa10.86□□□□□ -0.67
CCDC42-202ENST00000539522 ZFHX3Q15911 3703 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 FABP12A6NFH5 140 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 FAM25AB3EWG3 89 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 FAM25CB3EWG5 89 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 FAM25GB3EWG6 89 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 FAM157AC9JC47 383 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 F5H0A9 414 aaPredicted RBP10.85□□□□□ -0.67
CCDC42-202ENST00000539522 ANGPTL7O43827 346 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 NOS1APO75052 506 aaPredicted RBP10.85□□□□□ -0.67
CCDC42-202ENST00000539522 PAHP00439 452 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 PLATP00750 562 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 HCKP08631 526 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 SNRPBP14678 240 aaKnown RBP10.85□□□□□ -0.67
CCDC42-202ENST00000539522 CD40LGP29965 261 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 RBP2P50120 134 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 PPP5CP53041 499 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 MTCP1P56278 107 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 IL24Q13007 206 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 PDZK1IP1Q13113 114 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 KISS1Q15726 138 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 LHFPL2Q6ZUX7 228 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 SLC25A26Q70HW3 274 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 LAX1Q8IWV1 398 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 MFSD4AQ8N468 514 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 BOLLQ8N9W6 283 aaKnown RBP10.85□□□□□ -0.67
CCDC42-202ENST00000539522 OR10Z1Q8NGY1 313 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 BORCS5Q969J3 196 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 SLAMF9Q96A28 289 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 FAM3DQ96BQ1 224 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 CPNE2Q96FN4 548 aaPredicted RBP10.85□□□□□ -0.67
CCDC42-202ENST00000539522 C1orf159Q96HA4 380 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 CYYR1Q96J86 154 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 C1orf147Q96MC9 270 aaPredicted RBP10.85□□□□□ -0.67
CCDC42-202ENST00000539522 RABL2AQ9UBK7 228 aaPredicted RBP10.85□□□□□ -0.67
CCDC42-202ENST00000539522 OR5V1Q9UGF6 321 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 ZNF222Q9UK12 451 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 RABL2BQ9UNT1 228 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 ARHGAP32A7KAX9 2087 aa10.85□□□□□ -0.67
CCDC42-202ENST00000539522 CREBBPQ92793 2442 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms