RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 BTNL8Q6UX41 500 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 LSMEM1Q8N8F7 131 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 OR8B12Q8NGG6 310 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 OR10D3Q8NH80 312 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 TAAR6Q96RI8 345 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 GNB4Q9HAV0 340 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 GREB1LQ9C091 1923 aaPredicted RBP12.88□□□□□ -0.35
CACNB1-206ENST00000539338 SULT1A3P0DMM9 295 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 SULT1A4P0DMN0 295 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 SPINK2P20155 84 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 PRDX4Q13162 271 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 ACER2Q5QJU3 275 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 ADAT1Q9BUB4 502 aaKnown RBP12.88□□□□□ -0.35
CACNB1-206ENST00000539338 SLC25A30Q5SVS4 291 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 GGNBP1Q5YKI7 109 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 ZNF574Q6ZN55 896 aaPredicted RBP12.87□□□□□ -0.35
CACNB1-206ENST00000539338 ABI3BPQ7Z7G0 1075 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 SFTPA2Q8IWL1 248 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 ZNF561Q8N587 486 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 ANGPTL6Q8NI99 470 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 TXN2Q99757 166 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 ATAD5Q96QE3 1844 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 LANCL1O43813 399 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 YIF1AO95070 293 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 HPXP02790 462 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 BMP5P22003 454 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 ZBTB25P24278 435 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 UBAC2Q8NBM4 344 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 EDARADDQ8WWZ3 215 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 K7EQM0 130 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 C9orf152Q5JTZ5 239 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 RGS7BPQ6MZT1 257 aaPredicted RBP12.87□□□□□ -0.35
CACNB1-206ENST00000539338 FAM103A1Q9BTL3 118 aaKnown RBP12.87□□□□□ -0.35
CACNB1-206ENST00000539338 DTX4Q9Y2E6 619 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 CACNA1GO43497 2377 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 GSTZ1O43708 216 aaPredicted RBP12.87□□□□□ -0.35
CACNB1-206ENST00000539338 DUS4LO95620 317 aaKnown RBP12.87□□□□□ -0.35
CACNB1-206ENST00000539338 NTF3P20783 257 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 MPPED2Q15777 294 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 TIGITQ495A1 244 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 UQCC3Q6UW78 93 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 CORO2AQ92828 525 aa12.87□□□□□ -0.35
CACNB1-206ENST00000539338 TRAV8-7A0A075B6U6 113 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 SPRY3O43610 288 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 TAS2R45P59539 299 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 SIGIRRQ6IA17 410 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 OR11H7Q8NGC8 314 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 SLC52A3Q9NQ40 469 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 MMP26Q9NRE1 261 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 TCFL5Q9UL49 500 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 FZR1Q9UM11 496 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 SCN3AQ9NY46 2000 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 SOX15O60248 233 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 OR5AC1P0C628 307 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 NQO2P16083 231 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 KIR2DL1P43626 348 aaPredicted RBP12.86□□□□□ -0.35
CACNB1-206ENST00000539338 NMES1Q9C002 83 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 LAMP3Q9UQV4 416 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 RAXQ9Y2V3 346 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 METTL15P1P0C7V9 234 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 PJVKQ0ZLH3 352 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 RFESDQ8TAC1 157 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 CXorf58Q96LI9 332 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 TMED3Q9Y3Q3 217 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 TMEM30CPA0ZSE6 113 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 FAM24AA6NFZ4 105 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 CTDSPLO15194 276 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 CEACAM6P40199 344 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 RPS4XP62701 263 aaKnown RBP12.86□□□□□ -0.35
CACNB1-206ENST00000539338 KDF1Q8NAX2 398 aaPredicted RBP12.86□□□□□ -0.35
CACNB1-206ENST00000539338 TMEM104Q8NE00 496 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 DPF1Q92782 380 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 POLR2AP24928 1970 aaKnown RBP12.86□□□□□ -0.35
CACNB1-206ENST00000539338 DEFB108AA8MXU0 73 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 CLEC3BP05452 202 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 CPN1P15169 458 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 RHBDD2Q6NTF9 364 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 ZNF429Q86V71 674 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 ADGRG3Q86Y34 549 aa12.86□□□□□ -0.35
CACNB1-206ENST00000539338 OR4C45A6NMZ5 311 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 SOCS1O15524 211 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 NGFP01138 241 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 RPL11P62913 178 aaKnown RBP12.85□□□□□ -0.35
CACNB1-206ENST00000539338 ERHP84090 104 aaKnown RBP12.85□□□□□ -0.35
CACNB1-206ENST00000539338 SKP2Q13309 424 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 ZNF770Q6IQ21 691 aaPredicted RBP12.85□□□□□ -0.35
CACNB1-206ENST00000539338 OR5C1Q8NGR4 320 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 OR5B3Q8NH48 314 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 LURAP1Q96LR2 239 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 CES1P1Q9UKY3 287 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 ICAM5Q9UMF0 924 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 SPAG17Q6Q759 2223 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 C3orf85A0A1B0GTC6 90 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 PRR19A6NJB7 356 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 TMIGD3P0DMS9 266 aaPredicted RBP12.85□□□□□ -0.35
CACNB1-206ENST00000539338 TMEM108Q6UXF1 575 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 OR2Z1Q8NG97 314 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 PTPMT1Q8WUK0 201 aaPredicted RBP12.85□□□□□ -0.35
CACNB1-206ENST00000539338 G3V3Q6 166 aa12.85□□□□□ -0.35
CACNB1-206ENST00000539338 CYTIPO60759 359 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms