RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 UCK2Q9BZX2 261 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 OR51B6Q9H340 312 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF442Q9H7R0 627 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SYNDIG1Q9H7V2 258 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 OR2S2Q9NQN1 319 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF257Q9Y2Q1 563 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 YARS2Q9Y2Z4 477 aaKnown RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 BTAF1O14981 1849 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 GLI3P10071 1580 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PTPRSQ13332 1948 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF407Q9C0G0 2248 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 A2MP01023 1474 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ADGRB1O14514 1584 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 MROH2BQ7Z745 1585 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 IGKV1-8A0A0C4DH67 115 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 A0A1B0GVX0 72 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SERPINE3A8MV23 424 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 H0Y9J4 135 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 AIM2O14862 343 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 RAD51CO43502 376 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PSTPIP1O43586 416 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 DPM1O60762 260 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 FCN3O75636 299 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 FSTL3O95633 263 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 LY6G6DO95868 133 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CRYGDP07320 174 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 MMP7P09237 267 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SLC35G6P0C7Q6 338 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 STAG3L2P0CL84 134 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CD37P11049 281 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 MLNP12872 115 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PRPS1L1P21108 318 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 FABP6P51161 128 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CCR6P51684 374 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 STX17P56962 302 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 KRTAP10-5P60370 271 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CACNG7P62955 275 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CRADDP78560 199 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PAFAH1B3Q15102 231 aaKnown RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 GSG1Q2KHT4 349 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ACTL10Q5JWF8 245 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 KDM4DQ6B0I6 523 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PTRHD1Q6GMV3 140 aaKnown RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PLET1Q6UQ28 207 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 VTCN1Q7Z7D3 282 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CDKL3Q8IVW4 592 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 FAM9CQ8IZT9 166 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CMTM8Q8IZV2 173 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 KRT222Q8N1A0 295 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF676Q8N7Q3 588 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 COX18Q8N8Q8 333 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF420Q8TAQ5 688 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SLC7A13Q8TCU3 470 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 KLF14Q8TD94 323 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 TFGQ92734 400 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SDHCQ99643 169 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 RASL11BQ9BPW5 248 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF426Q9BUY5 554 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SAMD10Q9BYL1 202 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 FAM192AQ9GZU8 254 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SAV1Q9H4B6 383 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 TAS2R1Q9NYW7 299 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 RFNGQ9Y644 331 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 USH1CQ9Y6N9 552 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 MUC2Q02817 5179 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 NRCAMQ92823 1304 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 AGLP35573 1532 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ABCA9Q8IUA7 1624 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 TRAV40A0A0B4J280 105 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 IGHV5-51A0A0C4DH38 117 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 IGHV5-10-1A0A0J9YXX1 117 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ISPDA4D126 451 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 C9JQL5 133 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 GOLGA8KD6RF30 607 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CCNB2O95067 398 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ETHE1O95571 254 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 GNAO1P09471 354 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CCNOP22674 350 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ME2P23368 584 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CD70P32970 193 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ARR3P36575 388 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 GPR1P46091 355 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 TTPAP49638 278 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ARF6P62330 175 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 DR1Q01658 176 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 MEF2CQ06413 473 aaPredicted RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ST3GAL4Q11206 333 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 TWF1Q12792 350 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 BIKQ13323 160 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 HIST3H3Q16695 136 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF691Q5VV52 312 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 GPR107Q5VW38 600 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 EPGNQ6UW88 154 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CASP12Q6UXS9 341 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 STRADAQ7RTN6 431 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 SSX7Q7RTT5 188 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 RBM45Q8IUH3 476 aaKnown RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 C11orf53Q8IXP5 236 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 C11orf72Q8NBR9 251 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 OR5T3Q8NGG3 340 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms