RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 PLEKHJ1Q9NW61 149 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 RBFOX1Q9NWB1 397 aaKnown RBP9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 RASL12Q9NYN1 266 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 IL36GQ9NZH8 169 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 MTCH1Q9NZJ7 389 aa9.03□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ICE1Q9Y2F5 2266 aa9.02□□□□□ -0.96
TNFRSF1A-211ENST00000538363 IGHV1-69-2A0A0G2JMI3 117 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 A0A1W2PP11 408 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TMEM14DPA8MWL7 114 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CD55P08174 381 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ADH4P08319 380 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CD37P11049 281 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CDK2P24941 298 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 COL8A1P27658 744 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CFPP27918 469 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 DUSP1P28562 367 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 NR4A2P43354 598 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 NPBWR2P48146 333 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 EFNB2P52799 333 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 GNG2P59768 71 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FGF12P61328 243 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 RPS27AP62979 156 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TAF9Q16594 264 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SWI5Q1ZZU3 235 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 MST1LQ2TV78 715 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 RNASE12Q5GAN4 147 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM76BQ5HYJ3 339 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PYHIN1Q6K0P9 492 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ASCL4Q6XD76 172 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 WDR86Q86TI4 376 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 POC1AQ8NBT0 407 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TMEM104Q8NE00 496 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 DEFB108BQ8NET1 73 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 OR10R2Q8NGX6 335 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 OR10Z1Q8NGY1 313 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FCAMRQ8WWV6 532 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 RAB3CQ96E17 227 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TIMD4Q96H15 378 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 WDFY2Q96P53 400 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FGF23Q9GZV9 251 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 MIXL1Q9H2W2 232 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CXorf56Q9H5V9 222 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CHMP1AQ9HD42 196 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CADP27708 2225 aa9.02□□□□□ -0.97
TNFRSF1A-211ENST00000538363 A0A0A6YYH2 397 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 IGKV1-12A0A0C4DH73 117 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ISPDA4D126 451 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 A6NJ64 397 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 MCRIP1C9JLW8 97 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 XRCC3O43542 346 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CYB5R3P00387 301 aaPredicted RBP9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 IGKV1D-12P01611 117 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SFTPBP07988 381 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SOD3P08294 240 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CD3GP09693 182 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PGA5P0DJD9 388 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 MPZP25189 248 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SSTR2P30874 369 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PRSS3P35030 304 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CDKN1AP38936 164 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 GATA4P43694 442 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 RBM11P57052 281 aaKnown RBP9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TAS2R20P59543 309 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 UNC119Q13432 240 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PDCD1Q15116 288 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 KCNJ8Q15842 424 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 MICBQ29980 383 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PIGYQ3MUY2 71 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CDNFQ49AH0 187 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TRIQKQ629K1 86 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 WDR82Q6UXN9 313 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 LINC00596Q86U02 117 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 LYPD6Q86Y78 171 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 C19orf18Q8NEA5 215 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PPP1R35Q8TAP8 253 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 RDH5Q92781 318 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TRAF4Q9BUZ4 470 aaPredicted RBP9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SPACA1Q9HBV2 294 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 GCM1Q9NP62 436 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 DLL4Q9NR61 685 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FBLN5Q9UBX5 448 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 NPTNQ9Y639 398 aa9.01□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PPIAL4EA0A075B759 164 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 IGHV3OR15-7A0A075B7D8 119 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TRAV38-1A0A0B4J264 116 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 A0A0G2JMP0 313 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 A0A0X1KG70 313 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CLEC18AA5D8T8 446 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 NKX6-3A6NJ46 265 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PPIAL4DF5H284 164 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SIRPB1O00241 398 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 GEMIN2O14893 280 aaKnown RBP9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 WNT9BO14905 357 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ST8SIA5O15466 376 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PPIAL4FP0DN26 164 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FUT3P21217 361 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PTBP1P26599 531 aaKnown RBP eCLIP9□□□□□ -0.971e-7■■■□□ 14.7
TNFRSF1A-211ENST00000538363 CD80P33681 288 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PLA2G7Q13093 441 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 RBM39Q14498 530 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms