RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 DHRS11Q6UWP2 260 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 SUMF1Q8NBK3 374 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 APOBEC3DQ96AK3 386 aaPredicted RBP12.08□□□□□ -0.48
LIMK1-208ENST00000538333 OR10C1Q96KK4 312 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 POM121L2Q96KW2 1035 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 ZNF75AQ96N20 296 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 MICU1Q9BPX6 476 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 SLC25A32Q9H2D1 315 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 RASL12Q9NYN1 266 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 C14orf166Q9Y224 244 aaKnown RBP12.08□□□□□ -0.48
LIMK1-208ENST00000538333 PDCD6O75340 191 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 CRYZL1O95825 349 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 KNG1P01042 644 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 LYL1P12980 280 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 NPBWR2P48146 333 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 RAB1AP62820 205 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 C1QTNF12Q5T7M4 302 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 BRICD5Q6PL45 260 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 Q6ZPA2 131 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 PDZD9Q8IXQ8 264 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 INO80EQ8NBZ0 244 aaPredicted RBP12.08□□□□□ -0.48
LIMK1-208ENST00000538333 RELL2Q8NC24 303 aaPredicted RBP12.08□□□□□ -0.48
LIMK1-208ENST00000538333 HPSE2Q8WWQ2 592 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 MARS2Q96GW9 593 aaKnown RBP12.08□□□□□ -0.48
LIMK1-208ENST00000538333 WDYHV1Q96HA8 205 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 PAPOLGQ9BWT3 736 aaKnown RBP12.08□□□□□ -0.48
LIMK1-208ENST00000538333 PCDHB16Q9NRJ7 776 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 SPRR3Q9UBC9 169 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 KCNAB3O43448 404 aa12.07□□□□□ -0.48
LIMK1-208ENST00000538333 CD79AP11912 226 aa12.07□□□□□ -0.48
LIMK1-208ENST00000538333 ARR3P36575 388 aa12.07□□□□□ -0.48
LIMK1-208ENST00000538333 PRDX4Q13162 271 aa12.07□□□□□ -0.48
LIMK1-208ENST00000538333 SLC25A26Q70HW3 274 aa12.07□□□□□ -0.48
LIMK1-208ENST00000538333 RRNAD1Q96FB5 475 aaKnown RBP12.07□□□□□ -0.48
LIMK1-208ENST00000538333 PHYHIPLQ96FC7 376 aa12.07□□□□□ -0.48
LIMK1-208ENST00000538333 POM121Q96HA1 1249 aa12.07□□□□□ -0.48
LIMK1-208ENST00000538333 DHRS9Q9BPW9 319 aa12.07□□□□□ -0.48
LIMK1-208ENST00000538333 ZNF471Q9BX82 626 aaPredicted RBP12.07□□□□□ -0.48
LIMK1-208ENST00000538333 DEFB127Q9H1M4 99 aa12.07□□□□□ -0.48
LIMK1-208ENST00000538333 ZDHHC11Q9H8X9 412 aa12.07□□□□□ -0.48
LIMK1-208ENST00000538333 NECAP2Q9NVZ3 263 aa12.07□□□□□ -0.48
LIMK1-208ENST00000538333 PRSS50Q9UI38 385 aa12.07□□□□□ -0.48
LIMK1-208ENST00000538333 TEX13DA0A0J9YY54 714 aaPredicted RBP12.06□□□□□ -0.48
LIMK1-208ENST00000538333 IL18BPO95998 194 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 CST4P01036 141 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 NGFP01138 241 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 IFNA2P01563 188 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 PMELP40967 661 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 PDCD1Q15116 288 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 ZNF766Q5HY98 468 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 MED12LQ86YW9 2145 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 MCEMP1Q8IX19 187 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 POC1AQ8NBT0 407 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 BHLHE23Q8NDY6 225 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 LRRC20Q8TCA0 184 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 NARFLQ9H6Q4 476 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 ZNF552Q9H707 407 aaPredicted RBP12.06□□□□□ -0.48
LIMK1-208ENST00000538333 STARD10Q9Y365 291 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 FAM221AA4D161 298 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 CRYM-AS1A6NIL9 109 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 A8MXK9 166 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 CDRT15L2A8MXV6 281 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 FGF2P09038 288 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 FAM74A1Q5RGS3 127 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 MRPL21Q7Z2W9 205 aaKnown RBP12.06□□□□□ -0.48
LIMK1-208ENST00000538333 DCUN1D4Q92564 292 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 C2orf50Q96LR7 162 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 ARPC5LQ9BPX5 153 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 PFDN2Q9UHV9 154 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 SHANK1Q9Y566 2161 aa12.06□□□□□ -0.48
LIMK1-208ENST00000538333 TRGV5A0A0B4J1U4 118 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 F8VVB4 439 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 F8VWA3 439 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 GALR2O43603 387 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FUT3P21217 361 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 CD82P27701 267 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 ARG2P78540 354 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 MALLQ13021 153 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 CEACAM21Q3KPI0 293 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 ELP2Q6IA86 826 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 PRSS54Q6PEW0 395 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 SAXO1Q8IYX7 474 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 EIF4E3Q8N5X7 224 aaKnown RBP12.05□□□□□ -0.48
LIMK1-208ENST00000538333 LDAHQ9H6V9 325 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 METTL8Q9H825 291 aaKnown RBP12.05□□□□□ -0.48
LIMK1-208ENST00000538333 BARX1Q9HBU1 254 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-208ENST00000538333 OR5AC2Q9NZP5 309 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 ZNF629Q9UEG4 869 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A10PA6NDY2 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A18PA6NE21 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A16PA6NEW6 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A20PA6NIJ5 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A8PA6NJQ4 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A7PA6NKC0 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A22PA8MWA6 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A12PA8MX19 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A5PA8MXJ8 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A23PA8MXZ1 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A15PP0C7V4 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A13PP0C7W8 464 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms