RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 NAA60Q9H7X0 242 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 MLXQ9UH92 298 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 NTN3O00634 580 aaPredicted RBP12.43□□□□□ -0.42
USP44-203ENST00000537435 TERTO14746 1132 aaKnown RBP12.43□□□□□ -0.42
USP44-203ENST00000537435 P04436 131 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 RGS19P49795 217 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 TMEM42Q69YG0 159 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 SLC22A25Q6T423 547 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 ASCL4Q6XD76 172 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.43□□□□□ -0.42
USP44-203ENST00000537435 FBXL14Q8N1E6 418 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 OSR2Q8N2R0 312 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 FOXB1Q99853 325 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 LHX6Q9UPM6 363 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 ZFP36L1Q07352 338 aaKnown RBP12.42□□□□□ -0.42
USP44-203ENST00000537435 PDCD1Q15116 288 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 CEACAM16Q2WEN9 425 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 PHLDA2Q53GA4 152 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 TSPO2Q5TGU0 170 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 CLEC9AQ6UXN8 241 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 Q6ZRG5 221 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 FGFBP3Q8TAT2 258 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 KCNE4Q8WWG9 221 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 ERGIC1Q969X5 290 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 GALNT14Q96FL9 552 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 SGCZQ96LD1 299 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 BCO1Q9HAY6 547 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 CCDC85CA6NKD9 419 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 MBPP02686 304 aaPredicted RBP12.42□□□□□ -0.42
USP44-203ENST00000537435 SFTA3P0C7M3 94 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 FAM3AP98173 230 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 ZNF92Q03936 586 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 TRA2AQ13595 282 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP44-203ENST00000537435 KRTAP27-1Q3LI81 207 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 RAB11FIP2Q7L804 512 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 WNT5BQ9H1J7 359 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 PARP11Q9NR21 331 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 ST3GAL6Q9Y274 331 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 TIMM10BQ9Y5J6 103 aa12.42□□□□□ -0.42
USP44-203ENST00000537435 hCG_38984A0A1B0GV85 526 aa12.41□□□□□ -0.42
USP44-203ENST00000537435 PATE3B3GLJ2 98 aa12.41□□□□□ -0.42
USP44-203ENST00000537435 RFPL3SP0C7P2 107 aa12.41□□□□□ -0.42
USP44-203ENST00000537435 GLI4P10075 376 aa12.41□□□□□ -0.42
USP44-203ENST00000537435 NFYBP25208 207 aa12.41□□□□□ -0.42
USP44-203ENST00000537435 CD80P33681 288 aa12.41□□□□□ -0.42
USP44-203ENST00000537435 F2RL1P55085 397 aa12.41□□□□□ -0.42
USP44-203ENST00000537435 LYZL2Q7Z4W2 148 aa12.41□□□□□ -0.42
USP44-203ENST00000537435 MAFAQ8NHW3 353 aaPredicted RBP12.41□□□□□ -0.42
USP44-203ENST00000537435 OR2H1Q9GZK4 316 aa12.41□□□□□ -0.42
USP44-203ENST00000537435 PLEKHA2Q9HB19 425 aa12.41□□□□□ -0.42
USP44-203ENST00000537435 ZFP57Q9NU63 452 aa12.41□□□□□ -0.42
USP44-203ENST00000537435 YKT6O15498 198 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 DIRAS3O95661 229 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 CD5P06127 495 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 RPS18P62269 152 aaKnown RBP12.4□□□□□ -0.42
USP44-203ENST00000537435 PDZK1IP1Q13113 114 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 WIPI1Q5MNZ9 446 aaPredicted RBP12.4□□□□□ -0.42
USP44-203ENST00000537435 OR10D3Q8NH80 312 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 PIGCQ92535 297 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 BSCL2Q96G97 398 aaPredicted RBP12.4□□□□□ -0.42
USP44-203ENST00000537435 ZNF286AQ9HBT8 521 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 SLC2A9Q9NRM0 540 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 SLC7A11Q9UPY5 501 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 C9JQL5 133 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 E5RGE8 158 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 TRAPPC6AO75865 159 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 FUT6P51993 359 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 SWI5Q1ZZU3 235 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 PLCXD3Q63HM9 321 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 ABLIM2Q6H8Q1 611 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 LINC00518Q8N0U6 118 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 UBAC2Q8NBM4 344 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 OR5L1Q8NGL2 311 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 SUCNR1Q9BXA5 334 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 PARP12Q9H0J9 701 aaKnown RBP12.4□□□□□ -0.42
USP44-203ENST00000537435 ZNF391Q9UJN7 358 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 NSG2Q9Y328 171 aa12.4□□□□□ -0.42
USP44-203ENST00000537435 CCDC163A0A0D9SF12 145 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 XRCC2O43543 280 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 OR8U9P0C7N5 309 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 OTX2P32243 289 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 LIAT1Q6ZQX7 453 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 SKA3Q8IX90 412 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 IQCF2Q8IXL9 164 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 ZNF100Q8IYN0 542 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 OR11L1Q8NGX0 322 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 OR8U1Q8NH10 309 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 OR2V1Q8NHB1 315 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 ADGRG7Q96K78 797 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 C18orf12Q96KH6 178 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 RGCCQ9H4X1 137 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 IL36GQ9NZH8 169 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 ZNF175Q9Y473 711 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 LRRC3CA6NJW4 275 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 H7C1Q1 480 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 PDCD6O75340 191 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 PRKACAP17612 351 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 TCN2P20062 427 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 RFC3P40938 356 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 Q0VFX4 171 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms