RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 NCOR1O75376 2440 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 C5orf49A4QMS7 147 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 CRYM-AS1A6NIL9 109 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 ARGFXA6NJG6 315 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 F8VVB4 439 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 F8VWA3 439 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 IGHG3P01860 377 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 NUBP1P53384 320 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 CEACAM21Q3KPI0 293 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 EIF4E3Q8N5X7 224 aaKnown RBP8.02□□□□□ -1.13
UBE3B-207ENST00000537063 TMEM178AQ8NBL3 297 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 BCL2L2Q92843 193 aaPredicted RBP8.02□□□□□ -1.13
UBE3B-207ENST00000537063 RBPMSQ93062 196 aaKnown RBP8.02□□□□□ -1.13
UBE3B-207ENST00000537063 CXorf58Q96LI9 332 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 CMSS1Q9BQ75 279 aaKnown RBP8.02□□□□□ -1.13
UBE3B-207ENST00000537063 ZNF2Q9BSG1 426 aaPredicted RBP8.02□□□□□ -1.13
UBE3B-207ENST00000537063 NECAP2Q9NVZ3 263 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 RASL12Q9NYN1 266 aa8.02□□□□□ -1.13
UBE3B-207ENST00000537063 PTPRBP23467 1997 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 AHCTF1Q8WYP5 2266 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 TEX13DA0A0J9YY54 714 aaPredicted RBP8.01□□□□□ -1.13
UBE3B-207ENST00000537063 TPD52L2O43399 206 aaKnown RBP8.01□□□□□ -1.13
UBE3B-207ENST00000537063 PI3P19957 117 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 TNFSF10P50591 281 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 ARPC4P59998 168 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 PRDX4Q13162 271 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 SLC9A3R2Q15599 337 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 TMEM211Q6ICI0 200 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 STOML3Q8TAV4 291 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 THAP6Q8TBB0 222 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 RCC2Q9P258 522 aaKnown RBP8.01□□□□□ -1.13
UBE3B-207ENST00000537063 PRSS50Q9UI38 385 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 ST3GAL6Q9Y274 331 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 TRGV5A0A0B4J1U4 118 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 KANTRA0A1W2PQU2 76 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 EEF1E1-BLOC1S5C9J1V9 151 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 H0YIZ8 118 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 LRP3O75074 770 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 PLATP00750 562 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 OR5H8P0DN80 308 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 C9orf135Q5VTT2 229 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 C14orf166Q9Y224 244 aaKnown RBP8.01□□□□□ -1.13
UBE3B-207ENST00000537063 KCNMB2Q9Y691 235 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 PCNX2A6NKB5 2137 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 SPDEFO95238 335 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 IFNA2P01563 188 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 FTH1P19P0C7X4 201 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 RAB1AP62820 205 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 MALLQ13021 153 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 GUSBP1Q15486 140 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 PLEKHN1Q494U1 663 aaPredicted RBP8.01□□□□□ -1.13
UBE3B-207ENST00000537063 LRRC37A5PQ49AS3 106 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 FBXW9Q5XUX1 488 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 ZDHHC23Q8IYP9 409 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 MARS2Q96GW9 593 aaKnown RBP8.01□□□□□ -1.13
UBE3B-207ENST00000537063 C2orf50Q96LR7 162 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 BARX1Q9HBU1 254 aaPredicted RBP8.01□□□□□ -1.13
UBE3B-207ENST00000537063 SDHAF2Q9NX18 166 aa8.01□□□□□ -1.13
UBE3B-207ENST00000537063 C5orf51A6NDU8 294 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 A8MXK9 166 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 FAM25EA8MYX2 175 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 J3QW42 95 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 ADAP1O75689 374 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 FUT3P21217 361 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 WNT5AP41221 380 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 UCP3P55916 312 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 FGF12P61328 243 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 PRSS54Q6PEW0 395 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 MCEMP1Q8IX19 187 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 OR10C1Q96KK4 312 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 PAPOLGQ9BWT3 736 aaKnown RBP8□□□□□ -1.13
UBE3B-207ENST00000537063 C12orf4Q9NQ89 552 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 CLCF1Q9UBD9 225 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 STARD10Q9Y365 291 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 CSAG2Q9Y5P2 127 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 SLC22A20A6NK97 555 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 MPTX1A8MV57 137 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 FGF2P09038 288 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 ZNF250P15622 560 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 NPBWR2P48146 333 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 ARG2P78540 354 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 SLC25A26Q70HW3 274 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 MRPL21Q7Z2W9 205 aaKnown RBP8□□□□□ -1.13
UBE3B-207ENST00000537063 HSD17B13Q7Z5P4 300 aaPredicted RBP8□□□□□ -1.13
UBE3B-207ENST00000537063 RRNAD1Q96FB5 475 aaKnown RBP8□□□□□ -1.13
UBE3B-207ENST00000537063 PIK3IP1Q96FE7 263 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 GALNT14Q96FL9 552 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 ARPC5LQ9BPX5 153 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 DEFB127Q9H1M4 99 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 ZNF407Q9C0G0 2248 aa8□□□□□ -1.13
UBE3B-207ENST00000537063 I3L521 148 aa7.99□□□□□ -1.13
UBE3B-207ENST00000537063 CD79AP11912 226 aa7.99□□□□□ -1.13
UBE3B-207ENST00000537063 CCL2P13500 99 aa7.99□□□□□ -1.13
UBE3B-207ENST00000537063 ZP3P21754 424 aa7.99□□□□□ -1.13
UBE3B-207ENST00000537063 NAAAQ02083 359 aa7.99□□□□□ -1.13
UBE3B-207ENST00000537063 OR5A2Q8NGI9 324 aa7.99□□□□□ -1.13
UBE3B-207ENST00000537063 OR5P3Q8WZ94 311 aa7.99□□□□□ -1.13
UBE3B-207ENST00000537063 DYRK2Q92630 601 aa7.99□□□□□ -1.13
UBE3B-207ENST00000537063 GMPPAQ96IJ6 420 aaPredicted RBP7.99□□□□□ -1.13
UBE3B-207ENST00000537063 BOD1Q96IK1 185 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms