RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 STX3Q13277 289 aa3.01□□□□□ -1.93
PRKDC-208ENST00000536710 ATP6AP1LQ52LC2 224 aa3.01□□□□□ -1.93
PRKDC-208ENST00000536710 FAM131AQ6UXB0 335 aa3.01□□□□□ -1.93
PRKDC-208ENST00000536710 FAM19A1Q7Z5A9 133 aa3.01□□□□□ -1.93
PRKDC-208ENST00000536710 SGPP2Q8IWX5 399 aa3.01□□□□□ -1.93
PRKDC-208ENST00000536710 LINC00337Q8N6G1 96 aa3.01□□□□□ -1.93
PRKDC-208ENST00000536710 ZDHHC22Q8N966 263 aa3.01□□□□□ -1.93
PRKDC-208ENST00000536710 OR5H2Q8NGV7 314 aa3.01□□□□□ -1.93
PRKDC-208ENST00000536710 KLF14Q8TD94 323 aaPredicted RBP3.01□□□□□ -1.93
PRKDC-208ENST00000536710 BLNKQ8WV28 456 aa3.01□□□□□ -1.93
PRKDC-208ENST00000536710 TMEM239Q8WW34 195 aa3.01□□□□□ -1.93
PRKDC-208ENST00000536710 ZNF75AQ96N20 296 aa3.01□□□□□ -1.93
PRKDC-208ENST00000536710 SRRQ9GZT4 340 aa3.01□□□□□ -1.93
PRKDC-208ENST00000536710 NXF2Q9GZY0 626 aaKnown RBP3.01□□□□□ -1.93
PRKDC-208ENST00000536710 DHX35Q9H5Z1 703 aaKnown RBP3.01□□□□□ -1.93
PRKDC-208ENST00000536710 MARCOQ9UEW3 520 aaPredicted RBP3.01□□□□□ -1.93
PRKDC-208ENST00000536710 DOCK8Q8NF50 2099 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 TUBGCP6Q96RT7 1819 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 LOC389332A0A1B0GUA5 103 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 OR2AT4A6NND4 320 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 UPK2O00526 184 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 CST4P01036 141 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 HTR2BP41595 481 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 RAB38P57729 211 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 PSG3Q16557 428 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 UBE2NLQ5JXB2 153 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 HBMQ6B0K9 141 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 ZNF773Q6PK81 442 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 TBPL2Q6SJ96 375 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 SPINT4Q6UDR6 99 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 FA2HQ7L5A8 372 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 CDRT4Q8N9R6 151 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 SLC26A10Q8NG04 563 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 NELFBQ8WX92 580 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 ASB7Q9H672 318 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 OR2S2Q9NQN1 319 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 DHCR7Q9UBM7 475 aaKnown RBP3□□□□□ -1.93
PRKDC-208ENST00000536710 SLC22A7Q9Y694 548 aa3□□□□□ -1.93
PRKDC-208ENST00000536710 TSPOAP1O95153 1857 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 RBFOX3A6NFN3 312 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 C16orf90A8MZG2 172 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 UPK1AO00322 258 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 COX7A2P2O60397 106 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 IGLV3-19P01714 112 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 IGLV7-43P04211 117 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 CELP19835 753 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 SLC6A1P30531 599 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 TGM4P49221 684 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 BNIP2Q12982 314 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 ANGPT1Q15389 498 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 TRAM1Q15629 374 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 TRIP13Q15645 432 aaPredicted RBP2.99□□□□□ -1.93
PRKDC-208ENST00000536710 SSX1Q16384 188 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 CEACAM16Q2WEN9 425 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 ZNF404Q494X3 552 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 C16orf47Q6ZP98 133 aaPredicted RBP2.99□□□□□ -1.93
PRKDC-208ENST00000536710 LINC00596Q86U02 117 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 SYCE1Q8N0S2 351 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 OR6K3Q8NGY3 331 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 UBA3Q8TBC4 463 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 RBPMSQ93062 196 aaKnown RBP2.99□□□□□ -1.93
PRKDC-208ENST00000536710 ZMYND19Q96E35 227 aaPredicted RBP2.99□□□□□ -1.93
PRKDC-208ENST00000536710 SEC22CQ9BRL7 303 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 TREM1Q9NP99 234 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 IFT46Q9NQC8 304 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 DIABLOQ9NR28 239 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 HMGXB4Q9UGU5 601 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 MRM2Q9UI43 246 aaKnown RBP2.99□□□□□ -1.93
PRKDC-208ENST00000536710 POFUT2Q9Y2G5 429 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 ZNF780BQ9Y6R6 833 aa2.99□□□□□ -1.93
PRKDC-208ENST00000536710 BRCA1P38398 1863 aaKnown RBP2.99□□□□□ -1.93
PRKDC-208ENST00000536710 KIR2DS1A0A191URI9 304 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 GOLGA8IPA6NC78 632 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 LDOC1O95751 146 aaPredicted RBP2.98□□□□□ -1.93
PRKDC-208ENST00000536710 IGHV1-46P01743 117 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 IL12BP29460 328 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 MEF2CQ06413 473 aaPredicted RBP2.98□□□□□ -1.93
PRKDC-208ENST00000536710 TTMPQ5BVD1 217 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 KPRPQ5T749 579 aaPredicted RBP2.98□□□□□ -1.93
PRKDC-208ENST00000536710 PRR9Q5T870 116 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 AHSA2Q719I0 299 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 TNFRSF14Q92956 283 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 FMC1Q96HJ9 113 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 PPP1R36Q96LQ0 422 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 APOL4Q9BPW4 351 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 ANAPC13Q9BS18 74 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 TAC3Q9UHF0 121 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 CYB5R1Q9UHQ9 305 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 SLC22A14Q9Y267 594 aa2.98□□□□□ -1.93
PRKDC-208ENST00000536710 ZNF706Q9Y5V0 76 aaPredicted RBP2.98□□□□□ -1.93
PRKDC-208ENST00000536710 IGKV1D-17A0A075B6S4 117 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 OR6C70A6NIJ9 312 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 IGKV1-17P01599 117 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 OR5AC1P0C628 307 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 HLA-DMAP28067 261 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 CASQ1P31415 396 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 MAGEA3P43357 314 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 RAB25P57735 213 aa2.97□□□□□ -1.93
PRKDC-208ENST00000536710 USF2Q15853 346 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms