RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 PLEKHA6Q9Y2H5 1048 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 PLSCR5A0PG75 271 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 KRT33AO76009 404 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 SLC2A1P11166 492 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 TIMP3P35625 211 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 RPS27AP62979 156 aaKnown RBP6.89□□□□□ -1.31
COL21A1-212ENST00000535941 BLOC1S1P78537 153 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF92Q03936 586 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 SPOCK1Q08629 439 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 PMPCAQ10713 525 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 EIF2S3LQ2VIR3 472 aaKnown RBP6.89□□□□□ -1.31
COL21A1-212ENST00000535941 TMEM69Q5SWH9 247 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.89□□□□□ -1.31
COL21A1-212ENST00000535941 MYPOPQ86VE0 399 aaPredicted RBP6.89□□□□□ -1.31
COL21A1-212ENST00000535941 GINS4Q9BRT9 223 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 OR10A4Q9H209 315 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 PLEK2Q9NYT0 353 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 CRIM1Q9NZV1 1036 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF407Q9C0G0 2248 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 PTGER4P35408 488 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF93P35789 620 aaPredicted RBP6.89□□□□□ -1.31
COL21A1-212ENST00000535941 OR3A4PP47883 348 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 USF2Q15853 346 aaPredicted RBP6.89□□□□□ -1.31
COL21A1-212ENST00000535941 GUCA2BQ16661 112 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 PLAC9Q5JTB6 97 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 MTFR2Q6P444 385 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 SAXO1Q8IYX7 474 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 ZADH2Q8N4Q0 377 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 RXFP4Q8TDU9 374 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 GTF3AQ92664 365 aaKnown RBP6.89□□□□□ -1.31
COL21A1-212ENST00000535941 TUBD1Q9UJT1 453 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 TMEM50BP56557 158 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 RAB2AP61019 212 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 SRYQ05066 204 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 TBR1Q16650 682 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 LINC00303Q3SY05 128 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 RAB12Q6IQ22 244 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 FBXW12Q6X9E4 464 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 SLC36A1Q7Z2H8 476 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 SARAFQ96BY9 339 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 STARD4Q96DR4 205 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 PGAM5Q96HS1 289 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 Q96M66 194 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 C20orf85Q9H1P6 137 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 KLK11Q9UBX7 282 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 FLVCR2Q9UPI3 526 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 MYO7BQ6PIF6 2116 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 DBX1A6NMT0 343 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF35P13682 527 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 PRKXP51817 358 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 FABP9Q0Z7S8 132 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 KISS1Q15726 138 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 FAM189A2Q15884 450 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 MICBQ29980 383 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 C11orf88Q6PI97 169 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 Q6ZTK2 550 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 C1QL2Q7Z5L3 287 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 IZUMO1Q8IYV9 350 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 SEMA6DQ8NFY4 1073 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF671Q8TAW3 534 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 TCTEX1D2Q8WW35 142 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF775Q96BV0 537 aaPredicted RBP6.88□□□□□ -1.31
COL21A1-212ENST00000535941 OCSTAMPQ9BR26 566 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 SLC25A32Q9H2D1 315 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 MRPL15Q9P015 296 aaKnown RBP6.88□□□□□ -1.31
COL21A1-212ENST00000535941 CUL9Q8IWT3 2517 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 G3V3Q6 166 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 GIPP09681 153 aaPredicted RBP6.88□□□□□ -1.31
COL21A1-212ENST00000535941 PATE4P0C8F1 98 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 PNLIPRP3Q17RR3 467 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 OR2A2Q6IF42 318 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 RTN4RL2Q86UN3 420 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 ZSCAN4Q8NAM6 433 aaPredicted RBP6.88□□□□□ -1.31
COL21A1-212ENST00000535941 TMEM104Q8NE00 496 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 OR13C9Q8NGT0 318 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 HPSE2Q8WWQ2 592 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 FCAMRQ8WWV6 532 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 S100PBPQ96BU1 408 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 DMRTA2Q96SC8 542 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 SCNM1Q9BWG6 230 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF71Q9NQZ8 489 aaPredicted RBP6.88□□□□□ -1.31
COL21A1-212ENST00000535941 HSF4Q9ULV5 492 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 PIGLQ9Y2B2 252 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 POLR1DQ9Y2S0 133 aa6.88□□□□□ -1.31
COL21A1-212ENST00000535941 DMXL2Q8TDJ6 3036 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 ARPC1BO15143 372 aaKnown RBP6.87□□□□□ -1.31
COL21A1-212ENST00000535941 TCAPO15273 167 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 CREBL2O60519 120 aaPredicted RBP6.87□□□□□ -1.31
COL21A1-212ENST00000535941 PRAF2O60831 178 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 WDR1O75083 606 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 NDUFB6O95139 128 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 SERPINA5P05154 406 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 CSF1P09603 554 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 FAHP16930 419 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 HTR5AP47898 357 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 PPT1P50897 306 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 SRSF7Q16629 238 aaKnown RBP eCLIP6.87□□□□□ -1.31
COL21A1-212ENST00000535941 PLEKHN1Q494U1 663 aaPredicted RBP6.87□□□□□ -1.31
COL21A1-212ENST00000535941 KRTCAP3Q53RY4 240 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 LHFPL2Q6ZUX7 228 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms