RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 NXPH4O95158 308 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 CLDN1O95832 211 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 FADS2O95864 444 aaKnown RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SERPINA1P01009 418 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 OR9G9P0C7N8 305 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ZSCAN5DPP0CG00 497 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 KCNE1P15382 129 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 GABRR2P28476 465 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 LSM6P62312 80 aaKnown RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 MRPS10P82664 201 aaKnown RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 EMX1Q04741 257 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SLC10A1Q14973 349 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ABRAXAS2Q15018 415 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SHHQ15465 462 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 VAMP3Q15836 100 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SCGB2B2Q4G0G5 96 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 HIST2H3PS2Q5TEC6 136 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 REEP3Q6NUK4 255 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 Q6ZRP5 223 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF720Q7Z2F6 126 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 NAXDQ8IW45 347 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 PDZD9Q8IXQ8 264 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF100Q8IYN0 542 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 DEFB107AQ8IZN7 70 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 CLDN22Q8N7P3 220 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 UBAC2Q8NBM4 344 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ZNRF1Q8ND25 227 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 OR51D1Q8NGF3 324 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SDR42E1Q8WUS8 393 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 RORBQ92753 470 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 FAM131CQ96AQ9 280 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 CCDC126Q96EE4 140 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 CELF6Q96J87 481 aaKnown RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 TSNAXQ99598 290 aaKnown RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 LXNQ9BS40 222 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SNHG12Q9BXW3 62 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 CHST5Q9GZS9 411 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ESM1Q9NQ30 184 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 RASL12Q9NYN1 266 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 USE1Q9NZ43 259 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 FBXL3Q9UKT7 428 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ANGPT4Q9Y264 503 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 V9GYS6 101 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 MYH10P35580 1976 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 RALGAPA2Q2PPJ7 1873 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 FLNBO75369 2602 aaKnown RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 TRANK1O15050 2925 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SNAI2O43623 268 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ICOSLGO75144 302 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 CA11O75493 328 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 JCHAINP01591 159 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 HOXB7P09629 217 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF14P17017 642 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 RCC1P18754 421 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 CSNK2A2P19784 350 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SLC2A5P22732 501 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 MAGEA12P43365 314 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 CYB561P49447 251 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM50BP56557 158 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 MLF1P58340 268 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 RPS6P62753 249 aaKnown RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 CCL7P80098 99 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 PITPNAQ00169 270 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 KIAA0141Q14154 515 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SURF2Q15527 256 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF77Q15935 545 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM249Q2WGJ8 235 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ZC2HC1BQ5TFG8 222 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM236Q5W0B7 351 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ADNP2Q6IQ32 1131 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 Q6ZSR3 168 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 TCF24Q7RTU0 167 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM144Q7Z5S9 345 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 HS3ST5Q8IZT8 346 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 INO80EQ8NBZ0 244 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 OR4F15Q8NGB8 312 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 OR10G7Q8NGN6 311 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 NUBPLQ8TB37 319 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 PLPPR1Q8TBJ4 325 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ABHD3Q8WU67 409 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 C11orf52Q96A22 123 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 YIPF6Q96EC8 236 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 MALSU1Q96EH3 234 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 DNAJA3Q96EY1 480 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SDSLQ96GA7 329 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 OR8B4Q96RC9 309 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 GINS4Q9BRT9 223 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 BEX2Q9BXY8 128 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 FGFBP2Q9BYJ0 223 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 LIME1Q9H400 295 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF385DQ9H6B1 395 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SPHK2Q9NRA0 654 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 MRM2Q9UI43 246 aaKnown RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SLC35A3Q9Y2D2 325 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 CARHSP1Q9Y2V2 147 aaKnown RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 RBM7Q9Y580 266 aaKnown RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 DUOX1Q9NRD9 1551 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 SIPA1L1O43166 1804 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 FRMPD3Q5JV73 1810 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms