RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SLC36A1Q7Z2H8 476 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 PHC2Q8IXK0 858 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 SAXO1Q8IYX7 474 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 SVOPQ8N4V2 548 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 OR4M2Q8NGB6 313 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 THRSPQ92748 146 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 SDSLQ96GA7 329 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 FAHD2AQ96GK7 314 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 MED30Q96HR3 178 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 TMPRSS13Q9BYE2 586 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 NOX4Q9NPH5 578 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 TMEM138Q9NPI0 162 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 RBFOX1Q9NWB1 397 aaKnown RBP9.95□□□□□ -0.82
SSBP3-214ENST00000533209 OR5V1Q9UGF6 321 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 CDC42EP3Q9UKI2 254 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 FOXJ3Q9UPW0 622 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 SF3B6Q9Y3B4 125 aaKnown RBP9.95□□□□□ -0.82
SSBP3-214ENST00000533209 MAB21L2Q9Y586 359 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 INSIG2Q9Y5U4 225 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 ARHGAP32A7KAX9 2087 aa9.95□□□□□ -0.82
SSBP3-214ENST00000533209 LOC105371242A0A075B767 164 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 IGHV2-70DA0A0C4DH43 119 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 MAGEA13PA6NCF6 341 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 J3QLI3 93 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 GABRPO00591 440 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 MAGEB3O15480 346 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 KDM4BO94953 1096 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 CYB5AP00167 134 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 KNG1P01042 644 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 AVPP01185 164 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 TMEM225BP0DP42 221 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 MAPK3P27361 379 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-214ENST00000533209 BDKRB2P30411 391 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 PRDX2P32119 198 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 GABRA2P47869 451 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 CEBPDP49716 269 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-214ENST00000533209 RPS25P62851 125 aaKnown RBP9.94□□□□□ -0.82
SSBP3-214ENST00000533209 IKZF1Q13422 519 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 SSX1Q16384 188 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 KCTD21Q4G0X4 260 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 FAM27D1Q5T7N8 215 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 UBE2UQ5VVX9 321 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 ZNF773Q6PK81 442 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 C1orf229Q6ZS94 237 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-214ENST00000533209 SATL1Q86VE3 508 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 Q8IYB0 196 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 ZSCAN4Q8NAM6 433 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-214ENST00000533209 RAB40AQ8WXH6 277 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 EMG1Q92979 244 aaKnown RBP9.94□□□□□ -0.82
SSBP3-214ENST00000533209 TMEM203Q969S6 136 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 NKX3-1Q99801 234 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-214ENST00000533209 SHARPINQ9H0F6 387 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 IL36RNQ9UBH0 155 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 CKLFQ9UBR5 152 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 OPN4Q9UHM6 478 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 METRNQ9UJH8 293 aa9.94□□□□□ -0.82
SSBP3-214ENST00000533209 NDUFB3O43676 98 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 SFTPBP07988 381 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 UCHL1P09936 223 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 CALCBP10092 127 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 HOXB4P17483 251 aaPredicted RBP9.93□□□□□ -0.82
SSBP3-214ENST00000533209 PTGFRP43088 359 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 PAX8Q06710 450 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 C11orf91Q3C1V1 193 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 CHRFAM7AQ494W8 412 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 ARMCX4Q5H9R4 360 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 DDI2Q5TDH0 399 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 CD276Q5ZPR3 534 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 ASCL4Q6XD76 172 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 TMEM91Q6ZNR0 172 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 BTN2A1Q7KYR7 527 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 C1QL2Q7Z5L3 287 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 FAM58AQ8N1B3 248 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 ZNRF1Q8ND25 227 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 PXT1Q8NFP0 134 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 TNFAIP8L1Q8WVP5 186 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 ST8SIA4Q92187 359 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 CPNE2Q96FN4 548 aaPredicted RBP9.93□□□□□ -0.82
SSBP3-214ENST00000533209 GPER1Q99527 375 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 NUDT16L1Q9BRJ7 211 aaKnown RBP9.93□□□□□ -0.82
SSBP3-214ENST00000533209 BEX2Q9BXY8 128 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 PPIL3Q9H2H8 161 aaKnown RBP9.93□□□□□ -0.82
SSBP3-214ENST00000533209 C7orf69Q9H7B7 122 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 SEBOXQ9HB31 216 aaPredicted RBP9.93□□□□□ -0.82
SSBP3-214ENST00000533209 RHOFQ9HBH0 211 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 HMG20AQ9NP66 347 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 LPAR3Q9UBY5 353 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 OR14J1Q9UGF5 321 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 ZFHX3Q15911 3703 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 MXRA5Q9NR99 2828 aa9.93□□□□□ -0.82
SSBP3-214ENST00000533209 C2CD3Q4AC94 2353 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 KIR2DS1A0A191URI9 304 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 GPR37O15354 613 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 ENSAO43768 121 aaKnown RBP9.92□□□□□ -0.82
SSBP3-214ENST00000533209 ECDO95905 644 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-214ENST00000533209 MAS1P04201 325 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 PRKACAP17612 351 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 HNF1AP20823 631 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 PSMA1P25786 263 aaKnown RBP9.92□□□□□ -0.82
SSBP3-214ENST00000533209 GABRA5P31644 462 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms