RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 V9GY05 133 aa9.44□□□□□ -0.9
TRAPPC4-213ENST00000533149 ANXA2P2A6NMY6 339 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 CD300LBA8K4G0 201 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 G3V4G9 280 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 CTDSP2O14595 271 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 PPIAL4GP0DN37 164 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 CD37P11049 281 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 SLC2A2P11168 524 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 ATF1P18846 271 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 TUBG1P23258 451 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 BDKRB2P30411 391 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 BMXP51813 675 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 KLF3P57682 345 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 RPL15P61313 204 aaKnown RBP9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 ERVS71-1P61550 626 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 RELBQ01201 579 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR8B8Q15620 311 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 ZNF529Q6P280 563 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 SFXN4Q6P4A7 337 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 FIP1L1Q6UN15 594 aaKnown RBP9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 UNQ6126/PRO20091Q6UXV3 157 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 FBXW12Q6X9E4 464 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 UTS2BQ765I0 119 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR5AS1Q8N127 324 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR56B2PQ8NGI1 322 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR13C9Q8NGT0 318 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 PIGCQ92535 297 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 CCL17Q92583 94 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 HAVCR1Q96D42 359 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 TSC22D3Q99576 134 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 BCL2L14Q9BZR8 327 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR2J1Q9GZK6 312 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 TMEM138Q9NPI0 162 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 TUBG2Q9NRH3 451 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 GPR173Q9NS66 373 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 DAPK2Q9UIK4 370 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 RHBDD3Q9Y3P4 386 aa9.43□□□□□ -0.9
TRAPPC4-213ENST00000533149 CMYA5Q8N3K9 4069 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 IGKV1-9A0A0C4DH69 117 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 TRAPPC2LH3BP13 241 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 GMDSO60547 372 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 PRB2P02812 416 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 ALDOBP05062 364 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 RAC2P15153 192 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 UBE2V2Q15819 145 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 CLVS2Q5SYC1 327 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 HES5Q5TA89 166 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 ZBTB37Q5TC79 503 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 SAMD5Q5TGI4 173 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 GLT8D1Q68CQ7 371 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 TMEM42Q69YG0 159 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR2T2Q6IF00 324 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 MOB3CQ70IA8 216 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 C1orf174Q8IYL3 243 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 CSNK2A3Q8NEV1 391 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR52N4Q8NGI2 321 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR6Q1Q8NGQ2 317 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 SYNPRQ8TBG9 265 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 TBC1D15Q8TC07 691 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 PP6455Q8WZ26 134 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 MARS2Q96GW9 593 aaKnown RBP9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 C6orf62Q9GZU0 229 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 PRDM13Q9H4Q3 707 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 PPP1R3EQ9H7J1 279 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 COMMD3Q9UBI1 195 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 CACNG2Q9Y698 323 aa9.42□□□□□ -0.9
TRAPPC4-213ENST00000533149 ARHGAP32A7KAX9 2087 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 IGLV3-9A0A075B6K5 115 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 A0A0B4J203 849 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 ZNF816-ZNF321PA0A0X1KG74 233 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 IFITM5A6NNB3 132 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 ZNF850A8MQ14 1090 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 AIPO00170 330 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 SULT1B1O43704 296 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 PLATP00750 562 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 CST4P01036 141 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 NRASP01111 189 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 CSF1P09603 554 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 IGHV4-38-2P0DP08 117 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 ZNF250P15622 560 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 MPV17P39210 176 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 PAX8Q06710 450 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 PSG7Q13046 419 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 ZNF718Q3SXZ3 478 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 DMRTC1Q5HYR2 192 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 C1orf100Q5SVJ3 147 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 MZT2AQ6P582 158 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 KRT74Q7RTS7 529 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 RNF144BQ7Z419 303 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 LYPD6Q86Y78 171 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 TMEM86BQ8N661 226 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 KLF14Q8TD94 323 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 ACOT12Q8WYK0 555 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 AP3S1Q92572 193 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 FOXRED1Q96CU9 486 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 KCTD12Q96CX2 325 aaKnown RBP9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 DIRC2Q96SL1 478 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 CHST5Q9GZS9 411 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 PLGRKTQ9HBL7 147 aa9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 SMURF1Q9HCE7 757 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms