RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SDK2Q58EX2 2172 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 OR5H1A6NKK0 313 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 RAMP1O60894 148 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 S100A6P06703 90 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 ADH4P08319 380 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 ZNF708P17019 499 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 ERP29P30040 261 aaKnown RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 NKX2-5P52952 324 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 LIMK1P53667 647 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 PIGPP57054 158 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 TMEM65Q6PI78 240 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 MUC20Q8N307 709 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 KCNK15Q9H427 330 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 AUNIPQ9H7T9 357 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 PURGQ9UJV8 347 aaKnown RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 TICRRQ7Z2Z1 1910 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 J3QT63 122 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 PDCD6O75340 191 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 TSPAN15O95858 294 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 IFI6P09912 130 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 MDH2P40926 338 aaKnown RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 GABRA4P48169 554 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 MARCH1Q8TCQ1 289 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 WDYHV1Q96HA8 205 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 DLL3Q9NYJ7 618 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 UBQLN2Q9UHD9 624 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 ZMIZ1Q9ULJ6 1067 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 PINLYPA6NC86 204 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 ST8SIA5O15466 376 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 NEURL1O76050 574 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 PTHLHP12272 177 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 SPANXN5Q5MJ07 72 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 C8orf82Q6P1X6 216 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 ZNF546Q86UE3 836 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 RBMXL1Q96E39 390 aaKnown RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 DIRC2Q96SL1 478 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 C11orf54Q9H0W9 315 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 METTL17Q9H7H0 456 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 NYNRINQ9P2P1 1898 aaKnown RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 TRAV39A0A0B4J263 110 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 A0A0U1RQK1 487 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 CRYM-AS1A6NIL9 109 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 GEMIN2O14893 280 aaKnown RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 KRASP01116 189 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 FABP1P07148 127 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 NKX2-1P43699 371 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 CST9LP1Q5W188 147 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 ZNF826PQ6ZT77 177 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 MOB1BQ7L9L4 216 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 OR5A2Q8NGI9 324 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 TMEM230Q96A57 120 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 KCNK17Q96T54 332 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 OR2D2Q9H210 308 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 BARX1Q9HBU1 254 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-230ENST00000532245 NPTNQ9Y639 398 aa6.94□□□□□ -1.3
CTNND1-230ENST00000532245 ARHGEF17Q96PE2 2063 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-230ENST00000532245 TMEM210A6NLX4 147 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 SIX6O95475 246 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 CYB5R3P00387 301 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-230ENST00000532245 IAPPP10997 89 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 CSRP3P50461 194 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 PDLIM4P50479 330 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 NAAAQ02083 359 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 COL19A1Q14993 1142 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 OR13D1Q8NGV5 346 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 OR5H6Q8NGV6 325 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 SERTAD4Q9NUC0 356 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 TMEM8BA6NDV4 472 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 DCTN6O00399 190 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 ZNF354AO60765 605 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-230ENST00000532245 TBX6O95947 436 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-230ENST00000532245 RPS4Y1P22090 263 aaKnown RBP6.93□□□□□ -1.3
CTNND1-230ENST00000532245 ARL3P36405 182 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 GFRA1P56159 465 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 RPL31P62899 125 aaKnown RBP6.93□□□□□ -1.3
CTNND1-230ENST00000532245 BSPH1Q075Z2 132 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 PNLIPRP3Q17RR3 467 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 TRAT1Q6PIZ9 186 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 SLC25A47Q6Q0C1 308 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 OR2W3Q7Z3T1 314 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 LRRTM1Q86UE6 522 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 HYLS1Q96M11 299 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 HES4Q9HCC6 221 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 RBFOX1Q9NWB1 397 aaKnown RBP6.93□□□□□ -1.3
CTNND1-230ENST00000532245 KLHDC2Q9Y2U9 406 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 IGKV1D-42A0A075B6H8 117 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 SMIM18P0DKX4 95 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 HIST1H1DP16402 221 aaKnown RBP6.93□□□□□ -1.3
CTNND1-230ENST00000532245 RAB7AP51149 207 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 APH1BQ8WW43 257 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 A0A0B4J2A0 478 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 ALDH3B2P48448 385 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 TAGLNQ01995 201 aaKnown RBP6.93□□□□□ -1.3
CTNND1-230ENST00000532245 AESQ08117 197 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 CD276Q5ZPR3 534 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 C1orf174Q8IYL3 243 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 TPRX1Q8N7U7 411 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 RTN4IP1Q8WWV3 396 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-230ENST00000532245 FAM131CQ96AQ9 280 aa6.93□□□□□ -1.3
CTNND1-230ENST00000532245 KLK11Q9UBX7 282 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms