RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CLDND2Q8NHS1 167 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 ITLN1Q8WWA0 313 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 SLC25A28Q96A46 364 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 SGK3Q96BR1 496 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 RNF183Q96D59 192 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 REEP6Q96HR9 211 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR2V2Q96R30 315 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR8B4Q96RC9 309 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 MBOAT4Q96T53 435 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 NEU1Q99519 415 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 SLC29A1Q99808 456 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 TTTY10Q9BZA0 68 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 SLC22A4Q9H015 551 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 RGCCQ9H4X1 137 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 TMEM231Q9H6L2 316 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 ADGRL4Q9HBW9 690 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 TMEM106BQ9NUM4 274 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 CLN6Q9NWW5 311 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 IKZF2Q9UKS7 526 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 COPS3Q9UNS2 423 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 PPP1R3CQ9UQK1 317 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 NOP16Q9Y3C1 178 aaKnown RBP4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 WIPI2Q9Y4P8 454 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 LRP12Q9Y561 859 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 GMPPBQ9Y5P6 360 aa4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF469Q96JG9 3925 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P42-201ENST00000532126 FLNAP21333 2647 aaKnown RBP4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 CELSR1Q9NYQ6 3014 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 IGHV3-64DA0A0J9YX35 117 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 hCG_38984A0A1B0GV85 526 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 A0A1W2PQL4 384 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 ISPDA4D126 451 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 MFSD2BA6NFX1 497 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 ACOD1A6NK06 481 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 LRRC30A6NM36 301 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 SNTNA6NMZ2 147 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 PRR32B1ATL7 298 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 K7EQM0 130 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 WNT9BO14905 357 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 MAGEB4O15481 346 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 MPZL2O60487 215 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 GMDSO60547 372 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 ENTPD6O75354 484 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 WBP4O75554 376 aaKnown RBP4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 IRF2P14316 349 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 ANPEPP15144 967 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 RPA2P15927 270 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 GATA3P23771 443 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 IL2RGP31785 369 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 DCTDP32321 178 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 RPS19P39019 145 aaKnown RBP4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 CNN1P51911 297 aaKnown RBP4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 RIDAP52758 137 aaKnown RBP4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 SNRPGP62308 76 aaKnown RBP4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 FAM3AP98173 230 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 SNCBQ16143 134 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 LRRC36Q1X8D7 754 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF829Q3KNS6 432 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 SLC25A30Q5SVS4 291 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 SIGIRRQ6IA17 410 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 FAM166AQ6J272 317 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 PRR27Q6MZM9 219 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 PQLC2Q6ZP29 291 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF771Q7L3S4 317 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 COMMD2Q86X83 199 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 PHC2Q8IXK0 858 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 FTMTQ8N4E7 242 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 RFLNBQ8N5W9 214 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 LINC01356Q8N9X3 169 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 SPERTQ8NA61 448 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF555Q8NEP9 628 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 CSNK2A3Q8NEV1 391 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR8B12Q8NGG6 310 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR52N4Q8NGI2 321 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR8S1Q8NH09 359 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF671Q8TAW3 534 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 FCGR1BQ92637 280 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 Q96MT0 163 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 TBX5Q99593 518 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 GAL3ST1Q99999 423 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 APOL4Q9BPW4 351 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 SPATA25Q9BR10 227 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 ADAT1Q9BUB4 502 aaKnown RBP4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF665Q9H7R5 613 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 C8orf4Q9NR00 106 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 FAM206AQ9NX38 181 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF319Q9P2F9 582 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 OR14J1Q9UGF5 321 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 ZNF391Q9UJN7 358 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 NPTNQ9Y639 398 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 A3GALT2U3KPV4 340 aa4.85□□□□□ -1.63
HMGB1P42-201ENST00000532126 TEP1Q99973 2627 aaKnown RBP4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 ARFGEF3Q5TH69 2177 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 A0A075B6Q4 140 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 LOC100130705A0A1B0GUX0 176 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 A0A1W2PPQ1 181 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 B4DSR2 109 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 E9PQ18 207 aa4.84□□□□□ -1.63
HMGB1P42-201ENST00000532126 TMEM178BH3BS89 294 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms