RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 CD300AQ9UGN4 299 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 ENOPH1Q9UHY7 261 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 SCML1Q9UN30 329 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 KLF13Q9Y2Y9 288 aaPredicted RBP1.74□□□□□ -2.13
CD44-234ENST00000531873 SNX24Q9Y343 169 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 FADS3Q9Y5Q0 445 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 S4R3C0 116 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 IQSEC2Q5JU85 1478 aa1.74□□□□□ -2.13
CD44-234ENST00000531873 NPHP4O75161 1426 aaPredicted RBP1.74□□□□□ -2.13
CD44-234ENST00000531873 A0A1B0GX12 115 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 RBFOX3A6NFN3 312 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 OR2AT4A6NND4 320 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 ZNF850A8MQ14 1090 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 LGALS9O00182 355 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 FFAR1O14842 300 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 BET1O15155 118 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 SCN2BO60939 215 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 RCBTB2O95199 551 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 RLN2P04090 185 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 IGKV5-2P06315 115 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 GIMD1P0DJR0 217 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 ZNF32P17041 273 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 IL1RNP18510 177 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 TUFMP49411 452 aaKnown RBP1.73□□□□□ -2.13
CD44-234ENST00000531873 ACOT2P49753 483 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 LINC00315P59091 139 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 PITPNAQ00169 270 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 CD164Q04900 197 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 ZNF616Q08AN1 781 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 OR4D1Q15615 310 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 TRAM1Q15629 374 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 BSXQ3C1V8 233 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 CEACAM21Q3KPI0 293 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 CLLU1OSQ5K130 101 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 FAM222AQ5U5X8 452 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 KCTD16Q68DU8 428 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 HBMQ6B0K9 141 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 MORN3Q6PF18 240 aaPredicted RBP1.73□□□□□ -2.13
CD44-234ENST00000531873 UNQ9165/PRO28630Q6UXU0 137 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 TPGS1Q6ZTW0 290 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 COMTD1Q86VU5 262 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 ORMDL3Q8N138 153 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 OSR2Q8N2R0 312 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 ZNF709Q8N972 641 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 OR8G5Q8NG78 346 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 OR4K17Q8NGC6 315 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 PDCD6IPQ8WUM4 868 aaKnown RBP1.73□□□□□ -2.13
CD44-234ENST00000531873 CCL17Q92583 94 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 GTF2H4Q92759 462 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 STARD4Q96DR4 205 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 SMIM8Q96KF7 97 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 OR10C1Q96KK4 312 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 BIRC8Q96P09 236 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 CATSPER2Q96P56 530 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 DOK1Q99704 481 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 TBL1XR1Q9BZK7 514 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 LINC00574Q9H8X3 128 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 DNAJC27Q9NZQ0 273 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 RBM12B-AS1Q9P1G2 102 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 PTPRMP28827 1452 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 GAPVD1Q14C86 1478 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 MRC2Q9UBG0 1479 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 CEP350Q5VT06 3117 aa1.73□□□□□ -2.13
CD44-234ENST00000531873 THOC2Q8NI27 1593 aaKnown RBP1.72□□□□□ -2.13
CD44-234ENST00000531873 SHANK1Q9Y566 2161 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 ELP1O95163 1332 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 SLIT3O75094 1523 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 A0A0G2JMP0 313 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 A0A0X1KG70 313 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 C7orf66A4D0T2 115 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 ISPDA4D126 451 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 TRPC5OSA6NMA1 111 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 BTNL10A8MVZ5 291 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 TCAPO15273 167 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 MAGEB4O15481 346 aaPredicted RBP1.72□□□□□ -2.13
CD44-234ENST00000531873 WISP3O95389 354 aaPredicted RBP1.72□□□□□ -2.13
CD44-234ENST00000531873 LHBP01229 141 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 MAS1P04201 325 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 OR4Q2P0C623 313 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 TAC1P20366 129 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 NTF3P20783 257 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 GCLMP48507 274 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 TTPAP49638 278 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 SLC18A1P54219 525 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 PRKCDQ05655 676 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 BAXQ07812 192 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 TRDNQ13061 729 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 Q499Y3 187 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 COX19Q49B96 90 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 KLHL12Q53G59 568 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 ACTBL2Q562R1 376 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 OR10J3Q5JRS4 329 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 ZNF678Q5SXM1 525 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 PDPNQ86YL7 162 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 CYP4Z2PQ8N1L4 340 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 STK40Q8N2I9 435 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 RNF10Q8N5U6 811 aaKnown RBP1.72□□□□□ -2.13
CD44-234ENST00000531873 ZNF555Q8NEP9 628 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 OR9A2Q8NGT5 310 aa1.72□□□□□ -2.13
CD44-234ENST00000531873 OR52N1Q8NH53 320 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms