RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 FAHD1Q6P587 224 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 TEX38Q6PEX7 206 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 WDR82Q6UXN9 313 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 COX15Q7KZN9 410 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 FA2HQ7L5A8 372 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 DET1Q7L5Y6 550 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 SLC16A9Q7RTY1 509 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 S100A7AQ86SG5 101 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 DOLPP1Q86YN1 238 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 DND1Q8IYX4 353 aaKnown RBP4.83□□□□□ -1.64
CD44-231ENST00000531110 KLHDC1Q8N7A1 406 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 ZNF614Q8N883 585 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 LRRC75AQ8NAA5 344 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 PLPP5Q8NEB5 264 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 LFNGQ8NES3 379 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 OR8G5Q8NG78 346 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 OR51S1Q8NGJ8 323 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 OR52E5Q8NH55 327 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 OR51Q1Q8NH59 317 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 CNIH3Q8TBE1 160 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 NEUROG1Q92886 237 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 TMEM45BQ96B21 275 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 FIZ1Q96SL8 496 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 ALG12Q9BV10 488 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 SLC25A51Q9H1U9 297 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 MED20Q9H944 212 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 ACTR8Q9H981 624 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 HHATLQ9HCP6 504 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 ACP6Q9NPH0 428 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 CBLN4Q9NTU7 201 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 MRPL16Q9NX20 251 aaKnown RBP4.83□□□□□ -1.64
CD44-231ENST00000531110 ABI3Q9P2A4 366 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 CLN8Q9UBY8 286 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 UQCR10Q9UDW1 63 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 ERRFI1Q9UJM3 462 aaPredicted RBP4.83□□□□□ -1.64
CD44-231ENST00000531110 TNFSF18Q9UNG2 199 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 MRPS28Q9Y2Q9 187 aaKnown RBP4.83□□□□□ -1.64
CD44-231ENST00000531110 LSM2Q9Y333 95 aaKnown RBP4.83□□□□□ -1.64
CD44-231ENST00000531110 PDCD11Q14690 1871 aaKnown RBP4.83□□□□□ -1.64
CD44-231ENST00000531110 BCORQ6W2J9 1755 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 TJP1Q07157 1748 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 TET3O43151 1660 aa4.83□□□□□ -1.64
CD44-231ENST00000531110 AHDC1Q5TGY3 1603 aaPredicted RBP4.83□□□□□ -1.64
CD44-231ENST00000531110 FRMPD3Q5JV73 1810 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 TRBV6-7A0A0A0MS04 114 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 C17orf105B2RV13 164 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 USP17L23D6RBM5 183 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 NPIPB11E5RHQ5 1161 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 F5H5P2 479 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 SULT2B1O00204 365 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 OR2C1O95371 312 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 SLC16A8O95907 504 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 CST1P01037 141 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 CXCL10P02778 98 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 CSN2P05814 226 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 SLC35G6P0C7Q6 338 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 PET100P0DJ07 73 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 IGHV4-30-4P0DP06 118 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 LAMP1P11279 417 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 BCKDHAP12694 445 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 PGAM2P15259 253 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 AMD1P17707 334 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 GPX3P22352 226 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 FCARP24071 287 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 CDAP32320 146 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 GPR6P46095 362 aaPredicted RBP4.82□□□□□ -1.64
CD44-231ENST00000531110 RPS10P46783 165 aaKnown RBP4.82□□□□□ -1.64
CD44-231ENST00000531110 GABRA2P47869 451 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 NPBWR2P48146 333 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 MARCKSL1P49006 195 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 GNG4P50150 75 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 TCTAP57738 103 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 OR12D2P58182 307 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 TAS2R43P59537 309 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 UBE2NP61088 152 aaKnown RBP4.82□□□□□ -1.64
CD44-231ENST00000531110 IL10RBQ08334 325 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 ZNF763Q0D2J5 394 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 LY6DQ14210 128 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 CLINT1Q14677 625 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 EFNB3Q15768 340 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 SSX1Q16384 188 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 ACOT6Q3I5F7 207 aaPredicted RBP4.82□□□□□ -1.64
CD44-231ENST00000531110 TTLL9Q3SXZ7 439 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 TRMT12Q53H54 448 aaKnown RBP4.82□□□□□ -1.64
CD44-231ENST00000531110 TMEM128Q5BJH2 165 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 SLC25A30Q5SVS4 291 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 FAM69BQ5VUD6 431 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 OR2T2Q6IF00 324 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 RBPMS2Q6ZRY4 209 aaKnown RBP4.82□□□□□ -1.64
CD44-231ENST00000531110 NEGR1Q7Z3B1 354 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 GLT6D1Q7Z4J2 308 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 TMPRSS11BQ86T26 416 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 TOMM5Q8N4H5 51 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 TMEM251Q8N6I4 163 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 POC1AQ8NBT0 407 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 SLC26A10Q8NG04 563 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 OR4D11Q8NGI4 311 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 OR5D16Q8NGK9 328 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 OR1P1Q8NH06 330 aa4.82□□□□□ -1.64
CD44-231ENST00000531110 KCNG3Q8TAE7 436 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms